FFCP PHASE1:Hg19::chr10:29787015..29787017,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:29787015..29787017,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr10:29787015..29787017,- | |description=CAGE_peak_at_chr10:29787015..29787017,- | ||
|id=chr10:29787015..29787017,- | |id=chr10:29787015..29787017,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.82e-21;1!UBERON:0006965;2.02e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.71e-21;1!DOID:3149;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.43e-21,1;DOID:3149,9.43e-21,1;DOID:3451,4.52e-11,2;DOID:4159,4.52e-11,2;DOID:0060122,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.18e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.30e-21;1!UBERON:0003831;2.30e-21;1!UBERON:0003898;2.30e-21;1!UBERON:0004830;2.30e-21;1!UBERON:0003830;2.30e-21;1!UBERON:0005175;2.30e-21;1!UBERON:0001774;2.30e-21;1!UBERON:0001103;2.30e-21;1!UBERON:0007029;5.71e-21;1!UBERON:0000014;1.28e-20;4!UBERON:0005090;2.23e-11;2!UBERON:0001630;2.23e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.30e-21,1;UBERON:0003831,2.30e-21,1;UBERON:0003898,2.30e-21,1;UBERON:0004830,2.30e-21,1;UBERON:0003830,2.30e-21,1;UBERON:0005175,2.30e-21,1;UBERON:0001774,2.30e-21,1;UBERON:0001103,2.30e-21,1;UBERON:0010084,2.30e-21,1;UBERON:0007029,4.22e-21,1;UBERON:0000014,1.41e-20,4;UBERON:0005090,2.23e-11,2;UBERON:0001630,2.23e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0,0,1.0429658368404,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,4.98119970627674,0,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.296521128680622,0,0.104421949505455,0,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0.176512253383001,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0.316801009558219,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0.549451649953598,0,0,1.82631744101899,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.513314034281235,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,5.63841140033983,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.506794004045748,0,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.606351566874658,0,0.342233301085281,0.202056159043763,0.0717222053926763,0.665320713092027,0.244209805832924,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0,0,1.0429658368404,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,4.98119970627674,0,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.296521128680622,0,0.104421949505455,0,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0.193978032976839,0.176512253383001,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0.429226048136571,0.669514372325618,0.671834724867263,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0.316801009558219,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0.549451649953598,0,0,1.82631744101899,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.513314034281235,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,5.63841140033983,0,0,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.506794004045748,0,0,0,0,0,0,0,0.103432995861895,0,0.714193294391221,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.606351566874658,0,0.342233301085281,0.202056159043763,0.0717222053926763,0.665320713092027,0.244209805832924,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr10:29787015..29787017,- | |short_description=p@chr10:29787015..29787017,- | ||
}} | }} |
Latest revision as of 13:02, 23 July 2015
Short description: | p@chr10:29787015..29787017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29787015..29787017, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.30e-21 | 1 |
respiratory system muscle | 2.30e-21 | 1 |
skeletal muscle of trunk | 2.30e-21 | 1 |
respiratory system skeletal muscle | 2.30e-21 | 1 |
thoracic segment muscle | 2.30e-21 | 1 |
chest organ | 2.30e-21 | 1 |
muscle of trunk | 2.30e-21 | 1 |
diaphragm | 2.30e-21 | 1 |
future diaphragm | 2.30e-21 | 1 |
surface | 4.22e-21 | 1 |
zone of skin | 1.41e-20 | 4 |
muscle structure | 2.23e-11 | 2 |
muscle organ | 2.23e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.43e-21 | 1 |
keratoacanthoma | 9.43e-21 | 1 |
skin carcinoma | 4.52e-11 | 2 |
skin cancer | 4.52e-11 | 2 |
integumentary system cancer | 4.52e-11 | 2 |