FFCP PHASE1:Hg19::chr10:33428309..33428322,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33428309..33428322,+ | |||
|coexpression_cluster_id=C23 | |coexpression_cluster_id=C23 | ||
|description=CAGE_peak_at_chr10:33428309..33428322,+ | |description=CAGE_peak_at_chr10:33428309..33428322,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!1.99e-28!18;CL:0000789!1.99e-28!18;CL:0002420!1.99e-28!18;CL:0002419!1.99e-28!18;CL:0000790!1.99e-28!18;CL:0000624!1.65e-27!6;CL:0000838!1.35e-23!52;CL:0000084!1.85e-23!25;CL:0000827!1.85e-23!25;CL:0000542!4.52e-23!53;CL:0000051!4.52e-23!53;CL:0000738!7.37e-18!140;CL:0000898!7.73e-15!3;CL:0002031!1.20e-14!124;CL:0000623!1.22e-14!3;CL:0000825!1.22e-14!3;CL:0002087!5.62e-14!119;CL:0000037!2.28e-13!172;CL:0000566!2.28e-13!172;CL:0000988!2.73e-12!182;CL:0002032!7.38e-12!165;CL:0000837!7.38e-12!165;CL:0000815!1.93e-10!2;CL:0000792!1.93e-10!2;CL:0002677!1.93e-10!2;CL:0000625!6.09e-10!11;CL:0002274!3.44e-08!5;CL:0000457!3.44e-08!5;CL:0002191!3.44e-08!5;CL:0000097!3.44e-08!5;CL:0000831!3.44e-08!5;CL:0002028!3.44e-08!5;CL:0000767!9.33e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.99e-28!18;CL:0000789!1.99e-28!18;CL:0002420!1.99e-28!18;CL:0002419!1.99e-28!18;CL:0000790!1.99e-28!18;CL:0000624!1.65e-27!6;CL:0000838!1.35e-23!52;CL:0000084!1.85e-23!25;CL:0000827!1.85e-23!25;CL:0000542!4.52e-23!53;CL:0000051!4.52e-23!53;CL:0000738!7.37e-18!140;CL:0000898!7.73e-15!3;CL:0002031!1.20e-14!124;CL:0000623!1.22e-14!3;CL:0000825!1.22e-14!3;CL:0002087!5.62e-14!119;CL:0000037!2.28e-13!172;CL:0000566!2.28e-13!172;CL:0000988!2.73e-12!182;CL:0002032!7.38e-12!165;CL:0000837!7.38e-12!165;CL:0000815!1.93e-10!2;CL:0000792!1.93e-10!2;CL:0002677!1.93e-10!2;CL:0000625!6.09e-10!11;CL:0002274!3.44e-08!5;CL:0000457!3.44e-08!5;CL:0002191!3.44e-08!5;CL:0000097!3.44e-08!5;CL:0000831!3.44e-08!5;CL:0002028!3.44e-08!5;CL:0000767!9.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.34e-56;6!CL:0000791;3.96e-41;18!CL:0000789;3.96e-41;18!CL:0002419;3.96e-41;18!CL:0000084;2.60e-29;25!CL:0000898;2.77e-29;3!CL:0000623;4.93e-29;3!CL:0000815;5.39e-20;2!CL:0000792;5.39e-20;2!CL:0002677;5.39e-20;2!CL:0000542;1.68e-13;53!CL:0000895;4.35e-11;1!CL:0000625;2.89e-08;11 | |ontology_enrichment_celltype_v019=CL:0000624;3.34e-56;6!CL:0000791;3.96e-41;18!CL:0000789;3.96e-41;18!CL:0002419;3.96e-41;18!CL:0000084;2.60e-29;25!CL:0000898;2.77e-29;3!CL:0000623;4.93e-29;3!CL:0000815;5.39e-20;2!CL:0000792;5.39e-20;2!CL:0002677;5.39e-20;2!CL:0000542;1.68e-13;53!CL:0000895;4.35e-11;1!CL:0000625;2.89e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.76e-56,6;CL:0000791,4.06e-41,18;CL:0000789,4.06e-41,18;CL:0002420,4.06e-41,18;CL:0002419,4.06e-41,18;CL:0000790,4.06e-41,18;CL:0000898,1.80e-29,3;CL:0000084,2.65e-29,25;CL:0000827,2.65e-29,25;CL:0000623,4.71e-29,3;CL:0000825,4.71e-29,3;CL:0000838,3.03e-24,52;CL:0000542,9.39e-24,53;CL:0000051,9.39e-24,53;CL:0000815,3.33e-20,2;CL:0000792,3.33e-20,2;CL:0002677,3.33e-20,2;CL:0000810,4.58e-11,1;CL:0000895,4.58e-11,1;CL:0002436,4.58e-11,1;CL:0002427,4.58e-11,1;CL:0002428,4.58e-11,1;CL:0002429,4.58e-11,1;CL:0002433,4.58e-11,1;CL:0002431,4.58e-11,1;CL:0002432,4.58e-11,1;CL:0002087,7.71e-10,115;CL:0002031,2.36e-09,120;CL:0000625,3.07e-08,11;CL:0000738,4.87e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.96e-41;18!CL:0000051;1.68e-13;53!CL:0002427;4.35e-11;1 | |ontology_enrichment_development_v019=CL:0000790;3.96e-41;18!CL:0000051;1.68e-13;53!CL:0002427;4.35e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,2.9506465517075,1.57204305099666,1.43921049299656,0,1.95553359980154,1.89379122293893,7.79306913631645,0.445641827540694,3.53527088969805,4.43067789167242,7.85331204918545,0,0.650296737799391,0,0,0.289803085735052,1.77943875794473,1.60524496853828,1.04535523804977,0.113309342697566,3.44898444241729,6.8725489096526,6.07247260846807,0,0,0,0.301150238155546,0.255973222308837,0,0,0,2.41928091869679,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.58753089831421,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0.28853842595289,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,2.9506465517075,1.57204305099666,1.43921049299656,0,1.95553359980154,1.89379122293893,7.79306913631645,0.445641827540694,3.53527088969805,4.43067789167242,7.85331204918545,0,0.650296737799391,0,0,0.289803085735052,1.77943875794473,1.60524496853828,1.04535523804977,0.113309342697566,3.44898444241729,6.8725489096526,6.07247260846807,0,0,0,0.301150238155546,0.255973222308837,0,0,0,2.41928091869679,1.33720097891754,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,2.58753089831421,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0.28853842595289,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:33428309..33428322,+ | |short_description=p@chr10:33428309..33428322,+ | ||
}} | }} |
Latest revision as of 13:21, 23 July 2015
Short description: | p@chr10:33428309..33428322, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33428309..33428322, + |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data