FFCP PHASE1:Hg19::chr10:3852591..3852602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3852591..3852602,- | |||
|coexpression_cluster_id=C554 | |coexpression_cluster_id=C554 | ||
|description=CAGE_peak_at_chr10:3852591..3852602,- | |description=CAGE_peak_at_chr10:3852591..3852602,- | ||
|id=chr10:3852591..3852602,- | |id=chr10:3852591..3852602,- | ||
|ontology_enrichment_celltype=CL:0000623;1.34e-38;3!CL:0000097;2.21e-23;5!CL:0000163;2.79e-13;9!CL:0002393;3.35e-09;6!CL:0002397;3.35e-09;6!CL:0000766;1.45e-08;69!CL:0000791;8.32e-07;18!CL:0000789;8.32e-07;18!CL:0002419;8.32e-07;18 | |ontology_enrichment_celltype=CL:0000738!2.06e-27!140;CL:0002031!3.41e-23!124;CL:0000037!4.19e-21!172;CL:0000566!4.19e-21!172;CL:0002032!1.22e-20!165;CL:0000837!1.22e-20!165;CL:0000988!1.38e-19!182;CL:0002087!2.23e-18!119;CL:0000766!7.87e-17!76;CL:0002274!8.13e-17!5;CL:0000457!8.13e-17!5;CL:0002191!8.13e-17!5;CL:0000097!8.13e-17!5;CL:0000831!8.13e-17!5;CL:0002028!8.13e-17!5;CL:0000623!1.24e-16!3;CL:0000825!1.24e-16!3;CL:0000791!1.55e-16!18;CL:0000789!1.55e-16!18;CL:0002420!1.55e-16!18;CL:0002419!1.55e-16!18;CL:0000790!1.55e-16!18;CL:0002057!2.24e-14!42;CL:0000839!2.55e-14!70;CL:0000557!4.52e-14!71;CL:0000624!2.09e-13!6;CL:0000860!2.96e-13!45;CL:0000084!1.48e-11!25;CL:0000827!1.48e-11!25;CL:0000763!1.61e-11!112;CL:0000049!1.61e-11!112;CL:0000838!1.29e-09!52;CL:0000542!2.15e-09!53;CL:0000051!2.15e-09!53;CL:0000163!2.23e-09!9;CL:0002194!1.30e-08!63;CL:0000576!1.30e-08!63;CL:0000040!1.30e-08!63;CL:0000559!1.30e-08!63;CL:0002009!2.78e-08!65;CL:0000134!3.45e-08!358;CL:0002320!6.72e-08!365;CL:0000767!9.99e-08!3;CL:0000625!1.66e-07!11;CL:0000034!3.10e-07!444;CL:0000048!5.61e-07!430;CL:0000219!7.02e-07!390;CL:0000723!8.81e-07!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000623;1.34e-38;3!CL:0000097;2.21e-23;5!CL:0000163;2.79e-13;9!CL:0002393;3.35e-09;6!CL:0002397;3.35e-09;6!CL:0000766;1.45e-08;69!CL:0000791;8.32e-07;18!CL:0000789;8.32e-07;18!CL:0002419;8.32e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.43e-38,3;CL:0000825,1.43e-38,3;CL:0000097,2.57e-23,5;CL:0002028,2.57e-23,5;CL:0000738,9.70e-19,136;CL:0002031,1.57e-18,120;CL:0002032,1.40e-15,161;CL:0000837,1.40e-15,161;CL:0000037,7.29e-15,168;CL:0000988,5.06e-14,177;CL:0000163,3.04e-13,9;CL:0000766,9.90e-13,72;CL:0002087,1.29e-11,115;CL:0000839,4.81e-11,66;CL:0000557,7.18e-11,67;CL:0000838,2.15e-08,52;CL:0000542,3.15e-08,53;CL:0000051,3.15e-08,53;CL:0000763,3.50e-08,108;CL:0000049,3.50e-08,108;CL:0000860,2.89e-07,42;CL:0002057,2.89e-07,42;CL:0000791,8.00e-07,18;CL:0000789,8.00e-07,18;CL:0002420,8.00e-07,18;CL:0002419,8.00e-07,18;CL:0000790,8.00e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;8.32e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.05e-12!80;UBERON:0002390!1.90e-11!102;UBERON:0003061!1.90e-11!102;UBERON:0002193!2.00e-11!112;UBERON:0001474!4.82e-11!86;UBERON:0002405!9.40e-10!115;UBERON:0004765!6.44e-09!101;UBERON:0001434!6.44e-09!101;UBERON:0002384!1.67e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.67e-09,76;UBERON:0001474,9.35e-09,82;UBERON:0004765,6.54e-08,90;UBERON:0002405,1.25e-07,93;UBERON:0002390,3.34e-07,98;UBERON:0003061,3.34e-07,98;UBERON:0001434,4.83e-07,100 | |||
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|short_description=p@chr10:3852591..3852602,- | |short_description=p@chr10:3852591..3852602,- | ||
}} | }} |
Latest revision as of 13:36, 23 July 2015
Short description: | p@chr10:3852591..3852602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3852591..3852602, - |
Coexpression cluster: | C554_Mast_Natural_CD8_CD14_CD4_Basophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.43e-38 | 3 |
pro-NK cell | 1.43e-38 | 3 |
mast cell | 2.57e-23 | 5 |
basophil mast progenitor cell | 2.57e-23 | 5 |
leukocyte | 9.70e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.57e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.40e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-15 | 161 |
hematopoietic stem cell | 7.29e-15 | 168 |
hematopoietic cell | 5.06e-14 | 177 |
endocrine cell | 3.04e-13 | 9 |
myeloid leukocyte | 9.90e-13 | 72 |
nongranular leukocyte | 1.29e-11 | 115 |
myeloid lineage restricted progenitor cell | 4.81e-11 | 66 |
granulocyte monocyte progenitor cell | 7.18e-11 | 67 |
lymphoid lineage restricted progenitor cell | 2.15e-08 | 52 |
lymphocyte | 3.15e-08 | 53 |
common lymphoid progenitor | 3.15e-08 | 53 |
myeloid cell | 3.50e-08 | 108 |
common myeloid progenitor | 3.50e-08 | 108 |
classical monocyte | 2.89e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.89e-07 | 42 |
mature alpha-beta T cell | 8.00e-07 | 18 |
alpha-beta T cell | 8.00e-07 | 18 |
immature T cell | 8.00e-07 | 18 |
mature T cell | 8.00e-07 | 18 |
immature alpha-beta T cell | 8.00e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.67e-09 | 76 |
bone element | 9.35e-09 | 82 |
skeletal element | 6.54e-08 | 90 |
immune system | 1.25e-07 | 93 |
hematopoietic system | 3.34e-07 | 98 |
blood island | 3.34e-07 | 98 |
skeletal system | 4.83e-07 | 100 |