FFCP PHASE1:Hg19::chr10:4823046..4823055,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:4823046..4823055,- | |||
|description=CAGE_peak_at_chr10:4823046..4823055,- | |||
|id=chr10:4823046..4823055,- | |||
|ontology_enrichment_celltype=CL:0002139!2.55e-41!24;CL:0000115!1.13e-32!35;CL:0002078!1.69e-25!44;CL:0000071!7.08e-25!18;CL:0002546!7.08e-25!18;CL:0002618!3.76e-22!3;CL:0005020!1.86e-19!6;CL:0002138!1.86e-19!6;CL:0005022!1.86e-19!6;CL:0000213!3.94e-19!57;CL:0000215!3.94e-19!57;CL:0000222!2.90e-14!119;CL:0002543!2.31e-11!6;CL:0002144!5.87e-11!3;CL:0002557!3.79e-08!1;CL:1000413!6.59e-08!9;CL:0000220!8.17e-08!246;CL:0002321!1.01e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.04e-34;3!CL:0000071;7.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.96e-34,3;CL:0000071,7.60e-07,18;CL:0002546,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;7.39e-07;18 | |||
|ontology_enrichment_disease=DOID:0060085!1.27e-08!1;DOID:3165!1.27e-08!1;DOID:0060121!1.27e-08!1;DOID:2438!1.27e-08!1;DOID:4418!1.27e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;5.04e-34;3!DOID:3908;4.66e-21;5!DOID:3905;2.31e-12;9!DOID:1324;5.74e-08;15!DOID:0050615;1.49e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.52e-30!69;UBERON:0002049!4.71e-26!79;UBERON:0007798!4.71e-26!79;UBERON:0001986!7.08e-25!18;UBERON:0004638!7.08e-25!18;UBERON:0004852!7.08e-25!18;UBERON:0001981!7.49e-21!60;UBERON:0007500!7.49e-21!60;UBERON:0004537!7.49e-21!60;UBERON:0006965!7.49e-21!60;UBERON:0000487!3.70e-20!22;UBERON:0004535!5.58e-20!110;UBERON:0001009!2.36e-19!113;UBERON:0006914!1.32e-17!25;UBERON:0004872!2.20e-16!84;UBERON:0001473!1.20e-14!8;UBERON:0004536!1.20e-14!8;UBERON:0006558!1.20e-14!8;UBERON:0002066!1.57e-13!5;UBERON:0002465!9.39e-12!10;UBERON:0001915!5.87e-11!3;UBERON:0001982!5.87e-11!3;UBERON:0003914!7.74e-11!118;UBERON:0001637!8.95e-10!42;UBERON:0003509!8.95e-10!42;UBERON:0004572!8.95e-10!42;UBERON:0000490!7.80e-09!138;UBERON:0004111!4.01e-08!241;UBERON:0003915!6.59e-08!9;UBERON:0004700!6.59e-08!9;UBERON:0001917!6.59e-08!9;UBERON:0001638!9.81e-08!9;UBERON:0003920!9.81e-08!9;UBERON:0004582!9.81e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.04e-34;3!UBERON:0001915;5.04e-34;3!UBERON:0001982;5.04e-34;3!UBERON:0004638;7.39e-07;18!UBERON:0001986;7.39e-07;18!UBERON:0004852;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.96e-34,3;UBERON:0001915,5.96e-34,3;UBERON:0001982,5.96e-34,3;UBERON:0004638,7.60e-07,18;UBERON:0001986,7.60e-07,18;UBERON:0004852,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.417989933073621,0.258416759169329,0,0,1.20848795132744,0,0.488124115096339,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37280437475228,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:4823046..4823055,- | |||
}} |
Latest revision as of 13:53, 23 July 2015
Short description: | p@chr10:4823046..4823055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4823046..4823055, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.96e-34 | 3 |
blood vessel endothelial cell | 7.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.96e-34 | 3 |
endothelium of capillary | 5.96e-34 | 3 |
capillary | 5.96e-34 | 3 |
blood vessel endothelium | 7.60e-07 | 18 |
endothelium | 7.60e-07 | 18 |
cardiovascular system endothelium | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |