FFCP PHASE1:Hg19::chr10:54399943..54399963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:54399943..54399963,+ | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr10:54399943..54399963,+ | |description=CAGE_peak_at_chr10:54399943..54399963,+ | ||
|id=chr10:54399943..54399963,+ | |id=chr10:54399943..54399963,+ | ||
|ontology_enrichment_celltype=CL:0002620!4.83e-51!23;CL:0000057!1.41e-14!75;CL:0000055!1.05e-11!180 | |ontology_enrichment_celltype=CL:0002620!4.83e-51!23;CL:0000057!1.41e-14!75;CL:0000055!1.05e-11!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.17e-16;23!CL:0000243;2.04e-10;15!CL:0000125;2.04e-10;15!CL:0000095;1.99e-09;17!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.17e-16,23;CL:0000243,2.04e-10,15;CL:0000125,2.04e-10,15;CL:0000030,2.04e-10,15;CL:0000339,2.04e-10,15;CL:0000095,1.99e-09,17;CL:0000123,1.99e-09,17;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.62e-15;10!CL:0000339;2.04e-10;15 | |||
|ontology_enrichment_disease=DOID:17!8.08e-19!5;DOID:450!8.08e-19!5;DOID:66!8.08e-19!5;DOID:423!8.08e-19!5;DOID:0080000!8.08e-19!5;DOID:11722!8.08e-19!5 | |ontology_enrichment_disease=DOID:17!8.08e-19!5;DOID:450!8.08e-19!5;DOID:66!8.08e-19!5;DOID:423!8.08e-19!5;DOID:0080000!8.08e-19!5;DOID:11722!8.08e-19!5 | ||
|ontology_enrichment_disease_v019=DOID:3093;2.57e-14;11!DOID:17;2.97e-09;5!DOID:450;2.97e-09;5!DOID:66;2.97e-09;5!DOID:423;2.97e-09;5!DOID:0080000;2.97e-09;5!DOID:11722;2.97e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.57e-14,11;DOID:17,2.97e-09,5;DOID:450,2.97e-09,5;DOID:66,2.97e-09,5;DOID:423,2.97e-09,5;DOID:0080000,2.97e-09,5;DOID:11722,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.02e-28!40;UBERON:0002199!2.34e-25!45;UBERON:0002416!2.34e-25!45;UBERON:0003102!3.67e-11!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.15e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.80e-09,41;UBERON:0002199,1.59e-08,46;UBERON:0002416,1.59e-08,46 | |||
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|short_description=p@chr10:54399943..54399963,+ | |short_description=p@chr10:54399943..54399963,+ | ||
}} | }} |
Latest revision as of 14:11, 23 July 2015
Short description: | p@chr10:54399943..54399963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54399943..54399963, + |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.17e-16 | 23 |
glial cell (sensu Vertebrata) | 2.04e-10 | 15 |
glial cell | 2.04e-10 | 15 |
glioblast | 2.04e-10 | 15 |
glioblast (sensu Vertebrata) | 2.04e-10 | 15 |
neuron associated cell | 1.99e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-09 | 17 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.80e-09 | 41 |
integument | 1.59e-08 | 46 |
integumental system | 1.59e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.57e-14 | 11 |
musculoskeletal system disease | 2.97e-09 | 5 |
myotonic disease | 2.97e-09 | 5 |
muscle tissue disease | 2.97e-09 | 5 |
myopathy | 2.97e-09 | 5 |
muscular disease | 2.97e-09 | 5 |
myotonic dystrophy | 2.97e-09 | 5 |