FFCP PHASE1:Hg19::chr10:5568006..5568018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-301bp_to_ENST00000442008_5end | |association_with_transcript=-301bp_to_ENST00000442008_5end | ||
|cluster_id=chr10:5568006..5568018,- | |||
|description=CAGE_peak_1_at_ENST00000442008_5end | |description=CAGE_peak_1_at_ENST00000442008_5end | ||
|id=chr10:5568006..5568018,- | |id=chr10:5568006..5568018,- | ||
|ontology_enrichment_celltype=CL:0002621!2.13e-12!3;CL:0002076!3.26e-10!43;CL:0002327!5.22e-10!4;CL:0000244!5.61e-09!4;CL:0000731!5.61e-09!4;CL:0002251!4.38e-08!21;CL:0002159!5.61e-07!13;CL:0000223!8.92e-07!59 | |ontology_enrichment_celltype=CL:0002621!2.13e-12!3;CL:0002076!3.26e-10!43;CL:0002327!5.22e-10!4;CL:0000244!5.61e-09!4;CL:0000731!5.61e-09!4;CL:0002251!4.38e-08!21;CL:0002159!5.61e-07!13;CL:0000223!8.92e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.23e-21;4!CL:0002231;1.33e-12;3!CL:0002621;1.41e-12;3!CL:0002076;1.56e-08;42!CL:0002251;2.94e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.24e-21,4;CL:0002231,1.19e-12,3;CL:0002621,1.26e-12,3;CL:0002076,1.90e-09,42;CL:0002251,2.94e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.71e-10;1 | |||
|ontology_enrichment_disease=DOID:1749!9.58e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.22e-15;14!DOID:3151;3.71e-10;1!DOID:3149;3.71e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.34e-15,14;DOID:3151,3.10e-10,1;DOID:3149,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!1.80e-16!21;UBERON:0000161!1.03e-15!35;UBERON:0000165!2.79e-14!28;UBERON:0000930!2.79e-14!28;UBERON:0001949!2.13e-12!3;UBERON:0001723!3.24e-12!3;UBERON:0001033!3.24e-12!3;UBERON:0010056!3.24e-12!3;UBERON:0001911!5.22e-10!4;UBERON:0005333!5.22e-10!4;UBERON:0008425!5.22e-10!4;UBERON:0005311!5.22e-10!4;UBERON:0001004!1.40e-09!72;UBERON:0000974!1.74e-09!10;UBERON:0000153!2.25e-09!129;UBERON:0007811!2.25e-09!129;UBERON:0001042!2.83e-09!10;UBERON:0009145!2.83e-09!10;UBERON:0001444!6.75e-09!48;UBERON:0003102!9.86e-09!95;UBERON:0000341!1.18e-08!2;UBERON:0006562!2.11e-08!11;UBERON:0003729!1.25e-07!5;UBERON:0000365!2.91e-07!5;UBERON:0000033!4.02e-07!123;UBERON:0000078!5.30e-07!18 | |ontology_enrichment_uberon=UBERON:0000166!1.80e-16!21;UBERON:0000161!1.03e-15!35;UBERON:0000165!2.79e-14!28;UBERON:0000930!2.79e-14!28;UBERON:0001949!2.13e-12!3;UBERON:0001723!3.24e-12!3;UBERON:0001033!3.24e-12!3;UBERON:0010056!3.24e-12!3;UBERON:0001911!5.22e-10!4;UBERON:0005333!5.22e-10!4;UBERON:0008425!5.22e-10!4;UBERON:0005311!5.22e-10!4;UBERON:0001004!1.40e-09!72;UBERON:0000974!1.74e-09!10;UBERON:0000153!2.25e-09!129;UBERON:0007811!2.25e-09!129;UBERON:0001042!2.83e-09!10;UBERON:0009145!2.83e-09!10;UBERON:0001444!6.75e-09!48;UBERON:0003102!9.86e-09!95;UBERON:0000341!1.18e-08!2;UBERON:0006562!2.11e-08!11;UBERON:0003729!1.25e-07!5;UBERON:0000365!2.91e-07!5;UBERON:0000033!4.02e-07!123;UBERON:0000078!5.30e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.23e-21;4!UBERON:0000974;9.09e-14;6!UBERON:0001949;1.41e-12;3!UBERON:0000161;2.15e-11;19!UBERON:0000166;2.15e-11;19!UBERON:0003729;4.32e-11;13!UBERON:0000344;8.13e-11;20!UBERON:0000997;5.79e-10;1!UBERON:0005056;5.79e-10;1!UBERON:0004176;5.79e-10;1!UBERON:0003343;6.34e-10;4!UBERON:0004785;6.34e-10;4!UBERON:0002372;8.99e-10;1!UBERON:0001961;8.99e-10;1!UBERON:0001744;8.99e-10;1!UBERON:0001042;8.99e-10;1!UBERON:0001735;8.99e-10;1!UBERON:0000165;1.12e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.24e-21,4;UBERON:0005333,7.24e-21,4;UBERON:0008425,7.24e-21,4;UBERON:0005311,7.24e-21,4;UBERON:0001949,1.26e-12,3;UBERON:0000161,3.62e-11,36;UBERON:0003729,4.32e-11,13;UBERON:0000344,7.97e-11,20;UBERON:0000076,1.03e-10,8;UBERON:0000997,5.79e-10,1;UBERON:0005056,5.79e-10,1;UBERON:0003343,6.93e-10,4;UBERON:0004785,6.93e-10,4;UBERON:0000166,7.94e-10,22;UBERON:0002372,8.24e-10,1;UBERON:0001961,8.24e-10,1;UBERON:0001744,8.24e-10,1;UBERON:0001735,8.24e-10,1;UBERON:0000974,2.06e-08,10;UBERON:0000165,2.07e-07,29;UBERON:0000930,2.07e-07,29 | |||
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| ||
|short_description=p1@ENST00000442008 | |short_description=p1@ENST00000442008 | ||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p1@ENST00000442008 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000442008_5end |
Coexpression cluster: | NA |
Association with transcript: | -301bp_to_ENST00000442008_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.24e-21 | 4 |
epithelial cell of prostate | 1.19e-12 | 3 |
gingival epithelial cell | 1.26e-12 | 3 |
endo-epithelial cell | 1.90e-09 | 42 |
epithelial cell of alimentary canal | 2.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.24e-21 | 4 |
mammary bud | 7.24e-21 | 4 |
mammary ridge | 7.24e-21 | 4 |
mammary placode | 7.24e-21 | 4 |
gingival epithelium | 1.26e-12 | 3 |
orifice | 3.62e-11 | 36 |
mouth mucosa | 4.32e-11 | 13 |
mucosa | 7.97e-11 | 20 |
external ectoderm | 1.03e-10 | 8 |
mammalian vulva | 5.79e-10 | 1 |
external female genitalia | 5.79e-10 | 1 |
mucosa of oral region | 6.93e-10 | 4 |
respiratory system mucosa | 6.93e-10 | 4 |
oral opening | 7.94e-10 | 22 |
tonsil | 8.24e-10 | 1 |
mucosa-associated lymphoid tissue | 8.24e-10 | 1 |
lymphoid tissue | 8.24e-10 | 1 |
tonsillar ring | 8.24e-10 | 1 |
neck | 2.06e-08 | 10 |
mouth | 2.07e-07 | 29 |
stomodeum | 2.07e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.34e-15 | 14 |
skin squamous cell carcinoma | 3.10e-10 | 1 |
keratoacanthoma | 3.10e-10 | 1 |