FFCP PHASE1:Hg19::chr10:6670226..6670229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6670226..6670229,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:6670226..6670229,+ | |description=CAGE_peak_at_chr10:6670226..6670229,+ | ||
|id=chr10:6670226..6670229,+ | |id=chr10:6670226..6670229,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.58e-38!18;CL:0000789!4.58e-38!18;CL:0002420!4.58e-38!18;CL:0002419!4.58e-38!18;CL:0000790!4.58e-38!18;CL:0000084!7.49e-26!25;CL:0000827!7.49e-26!25;CL:0000625!3.85e-24!11;CL:0000838!2.16e-15!52;CL:0000542!5.55e-15!53;CL:0000051!5.55e-15!53;CL:0000624!6.97e-14!6;CL:0002087!1.54e-08!119;CL:0000898!1.86e-07!3;CL:0000842!2.12e-07!3;CL:0000738!2.18e-07!140;CL:0000623!3.79e-07!3;CL:0000825!3.79e-07!3 | |ontology_enrichment_celltype=CL:0000791!4.58e-38!18;CL:0000789!4.58e-38!18;CL:0002420!4.58e-38!18;CL:0002419!4.58e-38!18;CL:0000790!4.58e-38!18;CL:0000084!7.49e-26!25;CL:0000827!7.49e-26!25;CL:0000625!3.85e-24!11;CL:0000838!2.16e-15!52;CL:0000542!5.55e-15!53;CL:0000051!5.55e-15!53;CL:0000624!6.97e-14!6;CL:0002087!1.54e-08!119;CL:0000898!1.86e-07!3;CL:0000842!2.12e-07!3;CL:0000738!2.18e-07!140;CL:0000623!3.79e-07!3;CL:0000825!3.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.04e-52;18!CL:0000789;2.04e-52;18!CL:0002419;2.04e-52;18!CL:0000625;1.08e-41;11!CL:0000084;5.00e-37;25!CL:0000624;5.47e-16;6!CL:0000542;2.10e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.56e-53,18;CL:0000789,9.56e-53,18;CL:0002420,9.56e-53,18;CL:0002419,9.56e-53,18;CL:0000790,9.56e-53,18;CL:0000625,1.26e-41,11;CL:0000084,2.92e-37,25;CL:0000827,2.92e-37,25;CL:0000838,2.69e-19,52;CL:0000542,7.05e-19,53;CL:0000051,7.05e-19,53;CL:0000624,2.40e-16,6;CL:0002087,4.04e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;2.04e-52;18!CL:0000051;2.10e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.18e-16!15;UBERON:0000179!1.18e-16!15;UBERON:0000463!1.18e-16!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.40e-14;15!UBERON:0000179;3.40e-14;15!UBERON:0000463;3.40e-14;15!UBERON:0000029;4.60e-07;1!UBERON:0001301;4.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.94e-14,15;UBERON:0000179,4.94e-14,15;UBERON:0000463,4.94e-14,15;UBERON:0000029,4.08e-07,1;UBERON:0001301,7.40e-07,1 | |||
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| ||
|short_description=p@chr10:6670226..6670229,+ | |short_description=p@chr10:6670226..6670229,+ | ||
}} | }} |
Latest revision as of 14:50, 23 July 2015
Short description: | p@chr10:6670226..6670229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6670226..6670229, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.56e-53 | 18 |
alpha-beta T cell | 9.56e-53 | 18 |
immature T cell | 9.56e-53 | 18 |
mature T cell | 9.56e-53 | 18 |
immature alpha-beta T cell | 9.56e-53 | 18 |
CD8-positive, alpha-beta T cell | 1.26e-41 | 11 |
T cell | 2.92e-37 | 25 |
pro-T cell | 2.92e-37 | 25 |
lymphoid lineage restricted progenitor cell | 2.69e-19 | 52 |
lymphocyte | 7.05e-19 | 53 |
common lymphoid progenitor | 7.05e-19 | 53 |
CD4-positive, alpha-beta T cell | 2.40e-16 | 6 |
nongranular leukocyte | 4.04e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 4.94e-14 | 15 |
haemolymphatic fluid | 4.94e-14 | 15 |
organism substance | 4.94e-14 | 15 |
lymph node | 4.08e-07 | 1 |
epididymis | 7.40e-07 | 1 |