FFCP PHASE1:Hg19::chr10:700369..700374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:700369..700374,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr10:700369..700374,- | |description=CAGE_peak_at_chr10:700369..700374,- | ||
|id=chr10:700369..700374,- | |id=chr10:700369..700374,- | ||
|ontology_enrichment_celltype=CL:0002566;5.92e-26;1!CL:0000148;5.13e-23;10!CL:0000147;1.14e-16;14!CL:0000710;6.87e-12;20!CL:0002567;1.41e-09;3!CL:0000075;5.58e-09;27!CL:0002077;5.80e-07;34 | |ontology_enrichment_celltype=CL:0000148!1.86e-11!10;CL:0000541!1.86e-11!10;CL:0002274!2.62e-08!5;CL:0000457!2.62e-08!5;CL:0002191!2.62e-08!5;CL:0000097!2.62e-08!5;CL:0000831!2.62e-08!5;CL:0002028!2.62e-08!5;CL:0000147!4.43e-08!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0002566;5.92e-26;1!CL:0000148;5.13e-23;10!CL:0000147;1.14e-16;14!CL:0000710;6.87e-12;20!CL:0002567;1.41e-09;3!CL:0000075;5.58e-09;27!CL:0002077;5.80e-07;34 | ||
|ontology_enrichment_disease=DOID:1909;1.07e-13;2 | |ontology_enrichment_celltype_v019_2=CL:0002566,2.78e-26,1;CL:0000148,4.42e-23,10;CL:0000541,4.42e-23,10;CL:0000147,1.02e-16,14;CL:0000710,6.38e-12,20;CL:0002567,1.54e-09,3;CL:0000075,5.29e-09,27;CL:0002077,2.83e-07,34 | ||
|ontology_enrichment_uberon=UBERON:0001875;1.07e-13;2!UBERON:0006514;1.07e-13;2!UBERON:0002240;1.41e-09;3!UBERON:0005174;1.41e-09;3!UBERON:0001137;1.41e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.41e-09;3!UBERON:0003056;1.41e-09;3!UBERON:0003057;1.41e-09;3 | ||
|ontology_enrichment_disease=DOID:1909!1.10e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.07e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.96e-52!57;UBERON:0005068!7.96e-52!57;UBERON:0006241!7.96e-52!57;UBERON:0007135!7.96e-52!57;UBERON:0002616!6.11e-46!59;UBERON:0002780!6.61e-45!41;UBERON:0001890!6.61e-45!41;UBERON:0006240!6.61e-45!41;UBERON:0002020!7.99e-45!34;UBERON:0003528!7.99e-45!34;UBERON:0001893!8.18e-45!34;UBERON:0003080!9.77e-44!42;UBERON:0002791!9.39e-42!33;UBERON:0000955!7.12e-41!69;UBERON:0006238!7.12e-41!69;UBERON:0001869!3.07e-38!32;UBERON:0005743!3.03e-37!86;UBERON:0001017!2.21e-36!82;UBERON:0003075!4.44e-35!86;UBERON:0007284!4.44e-35!86;UBERON:0007023!3.08e-33!115;UBERON:0002346!3.10e-33!90;UBERON:0000073!3.90e-33!94;UBERON:0001016!3.90e-33!94;UBERON:0003056!1.02e-31!61;UBERON:0002308!7.17e-30!9;UBERON:0000125!7.17e-30!9;UBERON:0002619!1.27e-24!22;UBERON:0002420!2.53e-23!9;UBERON:0007245!2.53e-23!9;UBERON:0010009!2.53e-23!9;UBERON:0010011!2.53e-23!9;UBERON:0000454!2.53e-23!9;UBERON:0009663!2.66e-22!7;UBERON:0000033!3.37e-22!123;UBERON:0000956!1.75e-21!25;UBERON:0000203!1.75e-21!25;UBERON:0000153!7.16e-21!129;UBERON:0007811!7.16e-21!129;UBERON:0001950!1.33e-18!20;UBERON:0004121!2.07e-18!169;UBERON:0002298!2.62e-18!8;UBERON:0000924!7.96e-18!173;UBERON:0006601!7.96e-18!173;UBERON:0000349!1.78e-14!5;UBERON:0006331!1.46e-13!3;UBERON:0000988!4.83e-13!3;UBERON:0000025!7.64e-12!194;UBERON:0000200!1.78e-11!6;UBERON:0000369!2.81e-10!4;UBERON:0002435!2.81e-10!4;UBERON:0000204!2.81e-10!4;UBERON:0010082!2.81e-10!4;UBERON:0001875!3.63e-10!2;UBERON:0006514!3.63e-10!2;UBERON:0001897!4.54e-10!2;UBERON:0001954!4.54e-10!2;UBERON:0003022!4.54e-10!2;UBERON:0002421!4.54e-10!2;UBERON:0002600!4.54e-10!2;UBERON:0003076!1.48e-09!15;UBERON:0003057!1.48e-09!15;UBERON:0002148!2.19e-09!2;UBERON:0009662!2.19e-09!2;UBERON:0004111!4.20e-09!241;UBERON:0001871!7.62e-09!7;UBERON:0004733!2.18e-08!12;UBERON:0002028!2.18e-08!12;UBERON:0007277!2.18e-08!12;UBERON:0000483!9.71e-08!309;UBERON:0004732!1.01e-07!13;UBERON:0000119!1.35e-07!312;UBERON:0000477!2.51e-07!286;UBERON:0000475!2.61e-07!365;UBERON:0000064!3.91e-07!219;UBERON:0002771!8.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;1.07e-13;2!UBERON:0006514;1.07e-13;2!UBERON:0002240;1.41e-09;3!UBERON:0005174;1.41e-09;3!UBERON:0001137;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,9.40e-14,2;UBERON:0006514,9.40e-14,2;UBERON:0002240,1.41e-09,3;UBERON:0005174,1.41e-09,3;UBERON:0001137,1.41e-09,3 | |||
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| ||
|short_description=p@chr10:700369..700374,- | |short_description=p@chr10:700369..700374,- | ||
}} | }} |
Latest revision as of 14:56, 23 July 2015
Short description: | p@chr10:700369..700374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:700369..700374, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 2.78e-26 | 1 |
melanocyte | 4.42e-23 | 10 |
melanoblast | 4.42e-23 | 10 |
pigment cell | 1.02e-16 | 14 |
neurecto-epithelial cell | 6.38e-12 | 20 |
light melanocyte | 1.54e-09 | 3 |
columnar/cuboidal epithelial cell | 5.29e-09 | 27 |
ecto-epithelial cell | 2.83e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 9.40e-14 | 2 |
pallidum | 9.40e-14 | 2 |
spinal cord | 1.41e-09 | 3 |
dorsal region element | 1.41e-09 | 3 |
dorsum | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.55e-13 | 2 |