FFCP PHASE1:Hg19::chr10:73501016..73501041,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73501016..73501041,+
|short_description=p@chr10:73501016..73501041,+
|description=CAGE_peak_at_chr10:73501016..73501041,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73501016..73501041,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:73501016..73501041,+ | |||
|id=chr10:73501016..73501041,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.58e-40!18;CL:0000789!6.58e-40!18;CL:0002420!6.58e-40!18;CL:0002419!6.58e-40!18;CL:0000790!6.58e-40!18;CL:0000084!6.18e-34!25;CL:0000827!6.18e-34!25;CL:0000625!6.27e-28!11;CL:0000838!8.93e-19!52;CL:0000542!2.64e-18!53;CL:0000051!2.64e-18!53;CL:0000624!3.32e-16!6;CL:0000738!4.54e-11!140;CL:0002087!1.72e-10!119;CL:0000842!7.37e-09!3;CL:0000898!1.01e-08!3;CL:0000623!2.59e-08!3;CL:0000825!2.59e-08!3;CL:0000767!1.11e-07!3;CL:0000037!1.54e-07!172;CL:0000566!1.54e-07!172;CL:0002031!3.18e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.87e-59;18!CL:0000789;5.87e-59;18!CL:0002419;5.87e-59;18!CL:0000084;3.01e-41;25!CL:0000625;8.56e-41;11!CL:0000624;2.26e-23;6!CL:0000542;1.48e-12;53!CL:0000226;1.78e-12;3!CL:0000842;1.78e-12;3!CL:0000898;2.62e-12;3!CL:0000623;1.29e-11;3!CL:0000815;1.03e-08;2!CL:0000792;1.03e-08;2!CL:0002677;1.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.46e-59,18;CL:0000789,6.46e-59,18;CL:0002420,6.46e-59,18;CL:0002419,6.46e-59,18;CL:0000790,6.46e-59,18;CL:0000084,3.23e-41,25;CL:0000827,3.23e-41,25;CL:0000625,8.43e-41,11;CL:0000838,8.03e-25,52;CL:0000542,2.94e-24,53;CL:0000051,2.94e-24,53;CL:0000624,2.54e-23,6;CL:0002087,1.56e-14,115;CL:0000738,1.61e-12,136;CL:0000226,2.12e-12,3;CL:0000842,2.12e-12,3;CL:0000898,3.37e-12,3;CL:0000623,1.37e-11,3;CL:0000825,1.37e-11,3;CL:0002031,5.64e-10,120;CL:0000037,5.21e-09,168;CL:0000815,1.21e-08,2;CL:0000792,1.21e-08,2;CL:0002677,1.21e-08,2;CL:0000988,2.94e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;5.87e-59;18!CL:0000051;1.48e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.22e-23!15;UBERON:0000179!1.22e-23!15;UBERON:0000463!1.22e-23!15;UBERON:0004177!4.24e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.16e-35;15!UBERON:0000179;6.16e-35;15!UBERON:0000463;6.16e-35;15!UBERON:0002390;2.92e-14;32!UBERON:0002193;2.59e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.64e-35,15;UBERON:0000179,5.64e-35,15;UBERON:0000463,5.64e-35,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.60435557976113,1.51907609501096,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,7.08155172409799,6.6811829667358,4.72883447698871,1.67186495390678,8.14805666583976,9.9424039204294,3.89653456815823,1.00269411196656,1.17842362989935,0.886135578334485,1.89562704635511,0.25618263945135,0.130059347559878,4.27538551969558,4.42160028457357,5.506258628966,15.4218025688543,16.3199905134725,17.7710390468461,2.71942422474159,4.21542542962113,4.12352934579156,8.6026695286631,4.45991580053735,3.90650072313851,6.65316431113862,8.2816315492775,10.4949021146623,1.24930726552346,3.31488152861624,1.64225599384209,4.23374160771938,2.13952156626806,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.07813787429759,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,4.09856981555372,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,4.56702848308952,5.35246044999663,3.41788312304498,8.09988036556483,7.4045209155515,3.8908398671563,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,1.41439311330634,0,0,0,0,0,0,0,0.244482888365733,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.60435557976113,1.51907609501096,0,0.971680998056939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,7.08155172409799,6.6811829667358,4.72883447698871,1.67186495390678,8.14805666583976,9.9424039204294,3.89653456815823,1.00269411196656,1.17842362989935,0.886135578334485,1.89562704635511,0.25618263945135,0.130059347559878,4.27538551969558,4.42160028457357,5.506258628966,15.4218025688543,16.3199905134725,17.7710390468461,2.71942422474159,4.21542542962113,4.12352934579156,8.6026695286631,4.45991580053735,3.90650072313851,6.65316431113862,8.2816315492775,10.4949021146623,1.24930726552346,3.31488152861624,1.64225599384209,4.23374160771938,2.13952156626806,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,1.07813787429759,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,4.09856981555372,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,4.56702848308952,5.35246044999663,3.41788312304498,8.09988036556483,7.4045209155515,3.8908398671563,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0,1.41439311330634,0,0,0,0,0,0,0,0.244482888365733,0,0,1.20764276154616,0 | ||
|short_description=p@chr10:73501016..73501041,+ | |||
}} | }} |
Latest revision as of 15:16, 23 July 2015
Short description: | p@chr10:73501016..73501041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73501016..73501041, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.46e-59 | 18 |
alpha-beta T cell | 6.46e-59 | 18 |
immature T cell | 6.46e-59 | 18 |
mature T cell | 6.46e-59 | 18 |
immature alpha-beta T cell | 6.46e-59 | 18 |
T cell | 3.23e-41 | 25 |
pro-T cell | 3.23e-41 | 25 |
CD8-positive, alpha-beta T cell | 8.43e-41 | 11 |
lymphoid lineage restricted progenitor cell | 8.03e-25 | 52 |
lymphocyte | 2.94e-24 | 53 |
common lymphoid progenitor | 2.94e-24 | 53 |
CD4-positive, alpha-beta T cell | 2.54e-23 | 6 |
nongranular leukocyte | 1.56e-14 | 115 |
leukocyte | 1.61e-12 | 136 |
single nucleate cell | 2.12e-12 | 3 |
mononuclear cell | 2.12e-12 | 3 |
naive T cell | 3.37e-12 | 3 |
natural killer cell | 1.37e-11 | 3 |
pro-NK cell | 1.37e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 5.64e-10 | 120 |
hematopoietic stem cell | 5.21e-09 | 168 |
regulatory T cell | 1.21e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.21e-08 | 2 |
naive regulatory T cell | 1.21e-08 | 2 |
hematopoietic cell | 2.94e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 5.64e-35 | 15 |
haemolymphatic fluid | 5.64e-35 | 15 |
organism substance | 5.64e-35 | 15 |