FFCP PHASE1:Hg19::chr10:90697895..90697934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90697895..90697934,+ | |||
|coexpression_cluster_id=C508 | |coexpression_cluster_id=C508 | ||
|description=CAGE_peak_at_chr10:90697895..90697934,+ | |description=CAGE_peak_at_chr10:90697895..90697934,+ | ||
|id=chr10:90697895..90697934,+ | |id=chr10:90697895..90697934,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.16e-17!180;CL:0000192!1.29e-11!42;CL:0000514!1.29e-11!42;CL:0000187!1.00e-10!54;CL:0000057!1.16e-10!75;CL:0000680!1.40e-10!57;CL:0000056!1.40e-10!57;CL:0000355!1.40e-10!57;CL:0000183!4.70e-10!59;CL:0000359!5.96e-10!32;CL:0000393!2.43e-08!60;CL:0000211!2.43e-08!60 | |ontology_enrichment_celltype=CL:0000055!1.16e-17!180;CL:0000192!1.29e-11!42;CL:0000514!1.29e-11!42;CL:0000187!1.00e-10!54;CL:0000057!1.16e-10!75;CL:0000680!1.40e-10!57;CL:0000056!1.40e-10!57;CL:0000355!1.40e-10!57;CL:0000183!4.70e-10!59;CL:0000359!5.96e-10!32;CL:0000393!2.43e-08!60;CL:0000211!2.43e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.40e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.40e-09,32;CL:0000192,1.48e-08,43;CL:0000514,1.48e-08,43;CL:0000057,3.26e-08,76;CL:0000187,9.01e-08,55;CL:0000136,1.32e-07,15;CL:0000680,4.87e-07,58;CL:0000056,4.87e-07,58;CL:0000355,4.87e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.65e-11!63;UBERON:0001015!2.65e-11!63;UBERON:0000383!2.65e-11!63;UBERON:0001134!2.23e-10!61;UBERON:0002036!2.23e-10!61;UBERON:0003082!2.23e-10!61;UBERON:0004290!6.91e-10!70;UBERON:0000914!3.20e-09!83;UBERON:0002329!3.20e-09!83;UBERON:0003077!3.20e-09!83;UBERON:0003059!3.20e-09!83;UBERON:0007282!3.20e-09!83;UBERON:0009618!3.20e-09!83;UBERON:0007285!3.20e-09!83;UBERON:0000486!1.19e-08!82;UBERON:0005256!1.57e-08!143;UBERON:0000475!7.02e-08!365;UBERON:0000481!1.07e-07!347;UBERON:0004872!1.13e-07!84 | |ontology_enrichment_uberon=UBERON:0002385!2.65e-11!63;UBERON:0001015!2.65e-11!63;UBERON:0000383!2.65e-11!63;UBERON:0001134!2.23e-10!61;UBERON:0002036!2.23e-10!61;UBERON:0003082!2.23e-10!61;UBERON:0004290!6.91e-10!70;UBERON:0000914!3.20e-09!83;UBERON:0002329!3.20e-09!83;UBERON:0003077!3.20e-09!83;UBERON:0003059!3.20e-09!83;UBERON:0007282!3.20e-09!83;UBERON:0009618!3.20e-09!83;UBERON:0007285!3.20e-09!83;UBERON:0000486!1.19e-08!82;UBERON:0005256!1.57e-08!143;UBERON:0000475!7.02e-08!365;UBERON:0000481!1.07e-07!347;UBERON:0004872!1.13e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,6.30e-08,64;UBERON:0001015,6.30e-08,64;UBERON:0000383,6.30e-08,64;UBERON:0003104,7.72e-08,160;UBERON:0009142,7.72e-08,160;UBERON:0005256,1.97e-07,122;UBERON:0001134,6.99e-07,62;UBERON:0002036,6.99e-07,62;UBERON:0003082,6.99e-07,62 | |||
|phase1_expression=1.63510541343501,4.49611100171065,6.3429481843187,21.0153926541574,28.6055100433464,25.2978171989107,63.3249695420776,1.26343974685366,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0,0,7.39557661096953,1.80808358407193,3.65155045193687,0.487932798790507,0,0,4.70182082217132,1.14494394852423,0.136874425072884,0.87879847716362,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24236503558474,1.44575660953827,2.50668955317945,0.579386075843295,0,0,0.378139268656271,2.88248216701333,1.05401742831751,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8364853915472,1.77282716330412,0.132409180813219,0,1.06400514659507,8.97084160227691,13.8773694448616,7.64669400093196,0,0.67355336034844,0.980771418680752,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0,0,5.19260551484969,0,2.15585442544872,0,0,0,1.75591048352335,9.19463387397059,2.25357088359895,2.26864366320042,1.4351170855109,2.98980344345994,2.33125091275518,0.900273288253207,0.412210116953756,2.83404594050192,2.04728541964749,0.506328996723799,1.65642908774038,2.27190396819703,1.84099797284599,0.161646056818812,3.90510551768276,3.92933183087797,1.52604533079439,0,0.545492241181669,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,1.6462960453256,8.82052268313252,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0.34779121492523,4.3441216867254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0.07333828582095,2.58543431515556,0,0,14.6265964121679,9.36066932202295,0,0,0,4.28933980974443,0,0,0.325736184293735,3.909311436168,0.791951872933429,1.20575750823834,0.871533458600294,0.599837947092342,0,0,0,5.5113716763064,8.04033550838797,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00068208423871,1.35632511849868,33.0673669833983,8.02930449587228,3.78485796081443,9.01988895443892,1.20378439891088,0,1.03473071292505,3.32112799267718,1.84369168541703,0.260650843404249,0,0.686286847621712,0,0,0,0,0,0,0.496215615637554,2.76231551918512,0.841980283299221,0.384417447767103,4.09365799253363,8.20354997832398,0,0.154209693802656,0.177561725313127,0.574890092096664,1.03850885836724,1.04589340613963,0,0,0.276242966807689,0.229628896329213,0.364182336013434,1.31124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.618246069886334,0.457847324091717,0.247528499761764,0,0,0,1.25671933779759,0.308097234229289,0,0.689182862422653,0,0,0.170453254832202,4.71869788927708,0,0,0.127612712494584,0,1.85938219718914,0.31481234683064,0,0.924100740528266,1.06461206063404,0,1.11194531462352,1.28812398067792,0,3.16379424718726,4.76575484809562,0.767693373934002,0,0,3.13979456079692,1.97859703341646,1.37268514868027,1.17812402345686,0.202182481573316,1.58510321173008,1.26377536871694,0,0.974853958525138,3.16950440270266,2.45699840534374,0.424216295861138,0,1.10273068709225,0.66343897524122,0.876901770507525,0.578775534266688,0,3.24656603140326,4.957175969596,3.66204283291914,0.286822704408103,2.35797698431491,1.07001315444375,0.354761064070598,0.422215270595328,1.64647446479951,0,0.349934720244983,0,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0,0,0,33.8721580026819,1.38141957765574,0,0,0,13.0636626817959,0,0,0,10.357557591878,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,1.21537496453305,0,0,0,0,0.295547618953547,0,0.10893846351899,0,7.7719761088835,0.113942055847001,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,0.530745387020035,3.05515072466813,0,0.494255755786011,0.417687798021821,0.134802265961354,2.40773294189637,0,0,0,0,1.97292201424695,6.04953580243319,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,5.06707337901887,0.171986032471617,0,0,0,6.30428607174726,0,4.29363407483012,0.137041924646751,0,0.0633107959558787,0,0,7.04394882639863,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0,0,3.86788897277961,0,2.51354161145029,4.35404805622199,0,0.399358000997982,0.858452096273142,0,1.07493555978762,28.1033909163075,0,0,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.86686278029118,0.419636705079985,0,0,0,5.00286728461357,1.32418394073086,0.25426853765475,0.542999601753713,1.72844298240254,4.24563568142232,0,0,0.340776043570843,0,0.58620893471233,1.32506888912221,0,0,0,0,0.747511887973863,0,1.24271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3725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|short_description=p@chr10:90697895..90697934,+ | |short_description=p@chr10:90697895..90697934,+ | ||
}} | }} |
Latest revision as of 16:30, 23 July 2015
Short description: | p@chr10:90697895..90697934, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90697895..90697934, + |
Coexpression cluster: | C508_Adipocyte_aorta_smooth_umbilical_bladder_hepatic_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.40e-09 | 32 |
smooth muscle cell | 1.48e-08 | 43 |
smooth muscle myoblast | 1.48e-08 | 43 |
fibroblast | 3.26e-08 | 76 |
muscle cell | 9.01e-08 | 55 |
fat cell | 1.32e-07 | 15 |
muscle precursor cell | 4.87e-07 | 58 |
myoblast | 4.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.87e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 6.30e-08 | 64 |
musculature | 6.30e-08 | 64 |
musculature of body | 6.30e-08 | 64 |
mesenchyme | 7.72e-08 | 160 |
entire embryonic mesenchyme | 7.72e-08 | 160 |
trunk mesenchyme | 1.97e-07 | 122 |
skeletal muscle tissue | 6.99e-07 | 62 |
striated muscle tissue | 6.99e-07 | 62 |
myotome | 6.99e-07 | 62 |