FFCP PHASE1:Hg19::chr11:104125418..104125428,+: Difference between revisions
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|id=chr11:104125418..104125428,+
|short_description=p@chr11:104125418..104125428,+
|description=CAGE_peak_at_chr11:104125418..104125428,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:104125418..104125428,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr11:104125418..104125428,+ | |||
|id=chr11:104125418..104125428,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;5.92e-08;6!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.92e-08,6;CL:0000138,5.92e-08,6;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!2.78e-26!1;DOID:4549!2.78e-26!1;DOID:5861!2.78e-26!1;DOID:6496!2.78e-26!1;DOID:1115!2.95e-20!20;DOID:201!1.85e-17!6;DOID:0060100!1.85e-17!6;DOID:4231!1.55e-13!2;DOID:1907!1.55e-13!2 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.91e-41;1!DOID:4549;9.91e-41;1!DOID:5861;9.91e-41;1!DOID:6496;9.91e-41;1!DOID:1115;1.34e-18;20!DOID:201;5.92e-08;6!DOID:0060100;5.92e-08;6!DOID:3001;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.91e-41,1;DOID:4549,9.91e-41,1;DOID:5861,9.91e-41,1;DOID:6496,9.91e-41,1;DOID:1115,1.34e-18,20;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6;DOID:3001,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.42e-50!2;UBERON:0002757!2.42e-50!2;UBERON:0010134!2.42e-50!2;UBERON:0002784!2.42e-50!2;UBERON:0005408!2.42e-50!2;UBERON:0001899!2.42e-50!2;UBERON:0003296!8.66e-26!4;UBERON:0010133!8.66e-26!4;UBERON:0001894!3.29e-15!7;UBERON:0006222!3.29e-15!7;UBERON:0002418!1.10e-09!3;UBERON:0004755!1.10e-09!3;UBERON:0002369!1.41e-09!3;UBERON:0001235!1.41e-09!3;UBERON:0006858!1.41e-09!3;UBERON:0002368!4.68e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.11e-21;2!UBERON:0002757;3.11e-21;2!UBERON:0010134;3.11e-21;2!UBERON:0005408;3.11e-21;2!UBERON:0001899;3.11e-21;2!UBERON:0002418;1.40e-14;3!UBERON:0004755;1.40e-14;3!UBERON:0002369;2.09e-14;3!UBERON:0001235;2.09e-14;3!UBERON:0006858;2.09e-14;3!UBERON:0003296;2.53e-11;4!UBERON:0010133;2.53e-11;4!UBERON:0002784;2.53e-11;4!UBERON:0001894;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.11e-21,2;UBERON:0002757,3.11e-21,2;UBERON:0010134,3.11e-21,2;UBERON:0005408,3.11e-21,2;UBERON:0001899,3.11e-21,2;UBERON:0002418,1.40e-14,3;UBERON:0004755,1.40e-14,3;UBERON:0002369,2.09e-14,3;UBERON:0001235,2.09e-14,3;UBERON:0006858,2.09e-14,3;UBERON:0003296,2.53e-11,4;UBERON:0010133,2.53e-11,4;UBERON:0002784,2.53e-11,4;UBERON:0001894,5.08e-07,7;UBERON:0006222,5.08e-07,7 | |||
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|short_description=p@chr11:104125418..104125428,+ | |||
}} | }} |
Latest revision as of 17:37, 23 July 2015
Short description: | p@chr11:104125418..104125428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:104125418..104125428, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.92e-08 | 6 |
chondrocyte | 5.92e-08 | 6 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.11e-21 | 2 |
regional part of epithalamus | 3.11e-21 | 2 |
secretory circumventricular organ | 3.11e-21 | 2 |
circumventricular organ | 3.11e-21 | 2 |
epithalamus | 3.11e-21 | 2 |
cartilage tissue | 1.40e-14 | 3 |
skeletal tissue | 1.40e-14 | 3 |
adrenal gland | 2.09e-14 | 3 |
adrenal cortex | 2.09e-14 | 3 |
adrenal/interrenal gland | 2.09e-14 | 3 |
gland of diencephalon | 2.53e-11 | 4 |
neuroendocrine gland | 2.53e-11 | 4 |
regional part of diencephalon | 2.53e-11 | 4 |
diencephalon | 5.08e-07 | 7 |
future diencephalon | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.91e-41 | 1 |
extraosseous chondrosarcoma | 9.91e-41 | 1 |
myxoid chondrosarcoma | 9.91e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-41 | 1 |
sarcoma | 1.34e-18 | 20 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |