FFCP PHASE1:Hg19::chr11:114189327..114189369,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:114189327..114189369,+ | |||
|coexpression_cluster_id=C388 | |||
|description=CAGE_peak_at_chr11:114189327..114189369,+ | |description=CAGE_peak_at_chr11:114189327..114189369,+ | ||
|id=chr11:114189327..114189369,+ | |id=chr11:114189327..114189369,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.24e-10;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-22!115;UBERON:0006947!1.21e-08!3;UBERON:0004054!1.21e-08!3;UBERON:0003135!5.10e-08!11 | |ontology_enrichment_uberon=UBERON:0007023!1.11e-22!115;UBERON:0006947!1.21e-08!3;UBERON:0004054!1.21e-08!3;UBERON:0003135!5.10e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.19e-23;3!UBERON:0004177;3.84e-14;5!UBERON:0005057;3.84e-14;5!UBERON:0003127;1.44e-09;2!UBERON:0001905;1.44e-09;2!UBERON:0002757;1.44e-09;2!UBERON:0010134;1.44e-09;2!UBERON:0005408;1.44e-09;2!UBERON:0001899;1.44e-09;2!UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.61e-23,3;UBERON:0004854,4.61e-23,3;UBERON:0009034,4.61e-23,3;UBERON:0002095,4.61e-23,3;UBERON:0004782,4.61e-23,3;UBERON:0003281,4.61e-23,3;UBERON:0009664,4.61e-23,3;UBERON:0002296,4.61e-23,3;UBERON:0005602,4.61e-23,3;UBERON:0001179,4.61e-23,3;UBERON:0006293,4.61e-23,3;UBERON:0004177,1.85e-10,7;UBERON:0005057,1.85e-10,7;UBERON:0001905,1.86e-09,2;UBERON:0002757,1.86e-09,2;UBERON:0010134,1.86e-09,2;UBERON:0005408,1.86e-09,2;UBERON:0001899,1.86e-09,2;UBERON:0003127,2.02e-09,2;UBERON:0000945,2.89e-09,8;UBERON:0010039,2.89e-09,8;UBERON:0002114,8.62e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,8.52651126492458,0.32592226663359,0.473447805734733,3.89653456815823,0.111410456885174,0,0,0,0.640456598628376,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,1.33770414044857,2.09071047609954,0.113309342697566,0,0.68725489096526,0.253019692019503,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.255524855279191,0,1.00885116665647,0,0.682986574053893,0.177404740325278,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,1.2217909337381,1.09578409555081,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0.303114792872958,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,1.00411087549747,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,8.52651126492458,0.32592226663359,0.473447805734733,3.89653456815823,0.111410456885174,0,0,0,0.640456598628376,1.04047478047903,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,1.33770414044857,2.09071047609954,0.113309342697566,0,0.68725489096526,0.253019692019503,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.255524855279191,0,1.00885116665647,0,0.682986574053893,0.177404740325278,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,1.2217909337381,1.09578409555081,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0.250707539292375,0.303114792872958,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,1.00411087549747,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr11:114189327..114189369,+ | |short_description=p@chr11:114189327..114189369,+ | ||
}} | }} |
Latest revision as of 18:23, 23 July 2015
Short description: | p@chr11:114189327..114189369, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:114189327..114189369, + |
Coexpression cluster: | C388_CD4_CD8_cord_Peripheral_Natural_Whole_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 4.61e-23 | 3 |
gastrointestinal system mesentery | 4.61e-23 | 3 |
stomach region | 4.61e-23 | 3 |
mesentery | 4.61e-23 | 3 |
gastrointestinal system serosa | 4.61e-23 | 3 |
mesentery of stomach | 4.61e-23 | 3 |
gut mesentery | 4.61e-23 | 3 |
dorsal mesentery | 4.61e-23 | 3 |
dorsal mesogastrium | 4.61e-23 | 3 |
peritoneal cavity | 4.61e-23 | 3 |
spleen primordium | 4.61e-23 | 3 |
hemopoietic organ | 1.85e-10 | 7 |
immune organ | 1.85e-10 | 7 |
pineal body | 1.86e-09 | 2 |
regional part of epithalamus | 1.86e-09 | 2 |
secretory circumventricular organ | 1.86e-09 | 2 |
circumventricular organ | 1.86e-09 | 2 |
epithalamus | 1.86e-09 | 2 |
open tracheal system trachea | 2.02e-09 | 2 |
stomach | 2.89e-09 | 8 |
food storage organ | 2.89e-09 | 8 |
duodenum | 8.62e-07 | 2 |