FFCP PHASE1:Hg19::chr11:119290202..119290216,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119290202..119290216,- | |||
|description=CAGE_peak_at_chr11:119290202..119290216,- | |description=CAGE_peak_at_chr11:119290202..119290216,- | ||
|id=chr11:119290202..119290216,- | |id=chr11:119290202..119290216,- | ||
|ontology_enrichment_celltype=CL:0000055!5.25e-19!180;CL:0000057!9.70e-16!75;CL:0002620!8.71e-08!23 | |ontology_enrichment_celltype=CL:0000055!5.25e-19!180;CL:0000057!9.70e-16!75;CL:0002620!8.71e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002521;3.48e-12;3!CL:0000197;6.09e-10;6!CL:0000098;6.09e-10;6!CL:0002167;6.09e-10;6!CL:0002583;4.81e-08;2!CL:0002334;2.43e-07;12!CL:0000136;3.01e-07;13!CL:0000499;3.27e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.69e-12,3;CL:0000197,6.51e-10,6;CL:0000098,6.51e-10,6;CL:0002167,6.51e-10,6;CL:0000136,1.01e-08,15;CL:0002583,4.35e-08,2;CL:0002334,3.32e-07,12;CL:0000499,3.38e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!3.17e-10!20;UBERON:0001017!7.26e-10!82;UBERON:0002619!7.40e-10!22;UBERON:0001049!1.06e-09!57;UBERON:0005068!1.06e-09!57;UBERON:0006241!1.06e-09!57;UBERON:0007135!1.06e-09!57;UBERON:0001869!1.20e-09!32;UBERON:0000475!1.85e-09!365;UBERON:0005743!2.21e-09!86;UBERON:0000956!3.13e-09!25;UBERON:0000203!3.13e-09!25;UBERON:0002616!7.53e-09!59;UBERON:0001893!1.07e-08!34;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0002791!3.09e-08!33;UBERON:0000955!3.12e-08!69;UBERON:0006238!3.12e-08!69;UBERON:0002780!1.16e-07!41;UBERON:0001890!1.16e-07!41;UBERON:0006240!1.16e-07!41;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45;UBERON:0000073!2.14e-07!94;UBERON:0001016!2.14e-07!94;UBERON:0003080!2.55e-07!42;UBERON:0002072!7.89e-07!5 | |ontology_enrichment_uberon=UBERON:0001950!3.17e-10!20;UBERON:0001017!7.26e-10!82;UBERON:0002619!7.40e-10!22;UBERON:0001049!1.06e-09!57;UBERON:0005068!1.06e-09!57;UBERON:0006241!1.06e-09!57;UBERON:0007135!1.06e-09!57;UBERON:0001869!1.20e-09!32;UBERON:0000475!1.85e-09!365;UBERON:0005743!2.21e-09!86;UBERON:0000956!3.13e-09!25;UBERON:0000203!3.13e-09!25;UBERON:0002616!7.53e-09!59;UBERON:0001893!1.07e-08!34;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0002791!3.09e-08!33;UBERON:0000955!3.12e-08!69;UBERON:0006238!3.12e-08!69;UBERON:0002780!1.16e-07!41;UBERON:0001890!1.16e-07!41;UBERON:0006240!1.16e-07!41;UBERON:0002199!2.14e-07!45;UBERON:0002416!2.14e-07!45;UBERON:0000073!2.14e-07!94;UBERON:0001016!2.14e-07!94;UBERON:0003080!2.55e-07!42;UBERON:0002072!7.89e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.67e-18;5!UBERON:0002190;3.48e-12;3!UBERON:0001013;6.62e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,7.41e-19,5;UBERON:0002190,1.69e-12,3;UBERON:0001013,3.93e-09,14 | |||
|phase1_expression=0.726713517082227,4.28201047781966,0.422863212287913,0,2.23480547213644,0,5.06599756336621,1.89515962028049,2.35067065379855,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0.940364164434263,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.50401373190767,1.01392563272577,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,2.0078563452417,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0.647491777472526,0.280901613404497,0.408308342509787,0.245668634623536,0.723280468230358,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.500474079487857,0,0.438977620880838,0.919463387397059,0.150238058906597,0,0,0.427114777637135,1.05965950579781,0.600182192168805,0.103052529238439,0.257640540045629,0,0.506328996723799,0.68205903612839,0.252433774244115,0.828449087780694,0.323292113637624,1.42003837006646,0.906768884048762,0.508681776931463,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.10366105501537,0.756962552626885,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,1.74306691720059,0.799783929456456,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,1.66376689224646,3.21172179834891,1.10391690523754,1.28855556491985,0,2.27407504055985,0,0,0.368738337083406,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,3.92924132206303,0.384417447767103,1.02341449813341,1.12597744800525,0,1.54209693802656,1.24293207719189,0.0821271560138091,0,0.697262270759755,0,0,0,0.574072240823034,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,4.22600587027022,0.136499911407986,1.83827061539827,0,0,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0,0.563391205064483,0,0.294747123039363,1.07001315444375,0.354761064070598,1.89996871767898,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0.211125408127993,0,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.221158519862449,0.591095237907095,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.104421949505455,0,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.37588825977293,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,0.687697182986169,1.66176135211674,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,3.45688596480507,1.63293680054705,0,0,1.02232813071253,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,3.17268288745104,0.250381861413,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,1.40227985908335,1.66441758450784,0,0.50313580350515,4.44905610798268,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,1.06336685823198,0,0.300515217994437,0.380805212168795,0.406870733204662,0.909243296012797,0.322231671127465,0.928067519756987,0.796191777397232,2.80019435264208,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,1.76337971845342,1.2249819094128,0.0642292250964595,1.41696576325585,0.159633859057151,1.23069818544453,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.337687923091973,1.56215619722769,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.8453114551668,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.815897882290976,0,0.5290268405154,3.34795516350076,0.924351257262837,2.16313281061895,0.252332849670158,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0.726713517082227,4.28201047781966,0.422863212287913,0,2.23480547213644,0,5.06599756336621,1.89515962028049,2.35067065379855,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0.940364164434263,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,1.50401373190767,1.01392563272577,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,2.0078563452417,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0.647491777472526,0.280901613404497,0.408308342509787,0.245668634623536,0.723280468230358,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.500474079487857,0,0.438977620880838,0.919463387397059,0.150238058906597,0,0,0.427114777637135,1.05965950579781,0.600182192168805,0.103052529238439,0.257640540045629,0,0.506328996723799,0.68205903612839,0.252433774244115,0.828449087780694,0.323292113637624,1.42003837006646,0.906768884048762,0.508681776931463,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.10366105501537,0.756962552626885,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,1.74306691720059,0.799783929456456,0,0,0,0,0,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,1.66376689224646,3.21172179834891,1.10391690523754,1.28855556491985,0,2.27407504055985,0,0,0.368738337083406,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.153461973288062,3.92924132206303,0.384417447767103,1.02341449813341,1.12597744800525,0,1.54209693802656,1.24293207719189,0.0821271560138091,0,0.697262270759755,0,0,0,0.574072240823034,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,4.22600587027022,0.136499911407986,1.83827061539827,0,0,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0,0.563391205064483,0,0.294747123039363,1.07001315444375,0.354761064070598,1.89996871767898,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0.211125408127993,0,0,0,0.102268682502155,0,1.55519793830904,0,0,0,0,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.221158519862449,0.591095237907095,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.104421949505455,0,0,1.1713222286267,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,1.37588825977293,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,0.687697182986169,1.66176135211674,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,3.45688596480507,1.63293680054705,0,0,1.02232813071253,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,3.17268288745104,0.250381861413,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,1.40227985908335,1.66441758450784,0,0.50313580350515,4.44905610798268,0.228840068396924,0.604923695052956,0.15543720058278,0.147855149989634,0.318593534327405,0,0,0,1.06336685823198,0,0.300515217994437,0.380805212168795,0.406870733204662,0.909243296012797,0.322231671127465,0.928067519756987,0.796191777397232,2.80019435264208,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0.706756583783524,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,1.76337971845342,1.2249819094128,0.0642292250964595,1.41696576325585,0.159633859057151,1.23069818544453,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.337687923091973,1.56215619722769,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.657727735628491,0,0,0,0.942693539496011,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.8453114551668,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.815897882290976,0,0.5290268405154,3.34795516350076,0.924351257262837,2.16313281061895,0.252332849670158,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr11:119290202..119290216,- | |short_description=p@chr11:119290202..119290216,- | ||
}} | }} |
Latest revision as of 19:01, 23 July 2015
Short description: | p@chr11:119290202..119290216, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119290202..119290216, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.69e-12 | 3 |
receptor cell | 6.51e-10 | 6 |
sensory epithelial cell | 6.51e-10 | 6 |
olfactory epithelial cell | 6.51e-10 | 6 |
fat cell | 1.01e-08 | 15 |
subcutaneous preadipocyte | 4.35e-08 | 2 |
preadipocyte | 3.32e-07 | 12 |
stromal cell | 3.38e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 7.41e-19 | 5 |
subcutaneous adipose tissue | 1.69e-12 | 3 |
adipose tissue | 3.93e-09 | 14 |