FFCP PHASE1:Hg19::chr11:119290792..119290808,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:119290792..119290808,-
|short_description=p4@BC009328
|description=CAGE_peak_4_at_BC009328_5end
|association_with_transcript=67bp_to_BC009328_5end
|Entre...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_BC009328_5end | |||
|cluster_id=chr11:119290792..119290808,- | |||
|coexpression_cluster_id=C879 | |||
|description=CAGE_peak_4_at_BC009328_5end | |||
|id=chr11:119290792..119290808,- | |||
|ontology_enrichment_celltype=CL:0000055!2.18e-15!180;CL:0000057!1.90e-14!75;CL:0002620!2.47e-08!23;CL:0000136!6.51e-08!15;CL:0002334!1.39e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.89e-11;13!CL:0002521;4.01e-08;3!CL:0000499;5.19e-08;28!CL:0000153;8.25e-08;9!CL:0000447;8.25e-08;9!CL:0002334;1.09e-07;12!CL:0002570;5.88e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.28e-14,15;CL:0000057,2.64e-09,76;CL:0000499,4.20e-08,28;CL:0002521,4.35e-08,3;CL:0002334,7.85e-08,12;CL:0000153,8.09e-08,9;CL:0000447,8.09e-08,9;CL:0000048,1.43e-07,427;CL:0000034,3.02e-07,441;CL:0000723,3.05e-07,433;CL:0000135,3.80e-07,3;CL:0000388,3.80e-07,3;CL:0000134,5.47e-07,354;CL:0002570,8.26e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.77e-10!365;UBERON:0001013!3.45e-09!14;UBERON:0001049!4.50e-08!57;UBERON:0005068!4.50e-08!57;UBERON:0006241!4.50e-08!57;UBERON:0007135!4.50e-08!57;UBERON:0003102!8.04e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.24e-18;14!UBERON:0002072;3.63e-08;5!UBERON:0002190;4.01e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.83e-17,14;UBERON:0002072,3.74e-08,5;UBERON:0002190,4.35e-08,3;UBERON:0007846,3.80e-07,3;UBERON:0000043,3.80e-07,3;UBERON:0007845,3.80e-07,3 | |||
|phase1_expression=2.90685406832891,6.63711624062048,0.704772020479856,5.00366491765652,3.12872766099101,4.36169262050184,5.06599756336621,3.15859936713415,7.05201196139564,0,0,0.436882744260345,0.263766978228454,0.74259811776028,0,0,2.41077811209591,0.730310090387373,0,0.246242116153576,0.204000691244253,1.56727360739044,0.85870796139317,0.958120975510189,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.50401373190767,3.18662341713812,0,1.45990461090791,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,2.58152958673932,0.709336764396714,0,0,0.74000264525148,0,0,0,0,0,0,0.312160076830321,0,0.597794722207204,0.469737994575059,0.161872944368132,0.561803226808994,0.408308342509787,0.491337269247072,0.413303124703062,4.75201142912821,2.47266929278557,0,0.718618141816238,0.168336113954066,0.250237039743928,0,1.31693286264251,3.0648779579902,1.20190447125277,0.113432183160021,0.89694817844431,2.77624605464138,1.27159140695737,0.600182192168805,1.13357782162283,0.257640540045629,0.930584281657949,0,1.36411807225678,0.757301322732344,1.38074847963449,0.969876340912871,1.42003837006646,1.81353776809752,0.847802961552438,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,1.16193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,3.21620469096443,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,3.57656445851882,0,0.531876233169741,2.08014873822732,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0,0.791951872933429,1.80863626235752,2.61460037580088,0.799783929456456,0,0,0,0,1.14861935834114,1.42636905040718,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,2.67643483195743,0.946214490203608,1.40569697991256,0.902838299183157,11.3703752027992,2.0694614258501,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0.303127571446259,0,0,1.24053903909388,0.306923946576125,3.92924132206303,0.640695746278505,1.53512174720011,0.64341568457443,2.96836132889982,0.616838775210622,4.79416658345443,1.23190734020714,0,1.97557643381931,0,0.200506470303285,0,0.574072240823034,0.728364672026868,2.22911505431021,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.676695028044854,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.623224249527161,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0.719489830333259,0,0.589062011728432,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,5.5148118461948,0,0,3.98063385144732,0.876901770507525,0,0,0.608731130888112,0,0,0.286822704408103,0.392996164052485,1.78335525740625,1.06428319221179,4.22215270595328,1.31717957183961,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,1.10513566212459,0,0,0,2.79935628895627,0,0,0,0,0,0,2.90799823828566,1.85536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0,0.295547618953547,1.75508317723178,0,0,0.461701551022782,0.341826167541004,0,0,0,0.31900115973192,2.83952539545773,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.313265848516366,0,0,1.87411556580271,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,1.20390222730132,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,1.76828463311521,1.51293380256957,1.66176135211674,0,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,7.77799342081141,2.28611152076586,0,0,0.170388021785422,0,0.146552233678082,0,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,1.58634144372552,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.895528817321244,2.33713309847224,6.10286447652875,0.757612021100357,2.0125432140206,1.77962244319307,0,1.05861646634267,0.310874401165561,0.887130899937803,1.11507737014592,0,0.621051827505038,0.829412415681711,0.797525143673985,1.5652351854352,1.20206087197775,0,0.406870733204662,0.727394636810238,0.966695013382396,1.85613503951397,0.796191777397232,1.20008329398946,1.03018711554838,3.36749488765919,1.26184898228651,0.192619830407303,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.918736432059601,0.256916900385838,0,0,1.8460472781668,0.252071696221718,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0.405225507710368,1.56215619722769,0.206686796501184,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0.354809480650555,0,0.171488009437418,0.203909198930495,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.308696632431779,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0.509781344063451,0.563903507879121,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,1.42782129400921,0,0,1.85997509083376,1.84870251452567,2.59575937274273,0.126166424835079,0,0.126698501011437,0.713921808193872,0,0.459474497674225,0.250707539292375,2.1218035501107,0.535928260312357,0.829169439458779,0,0,0.23806443146374,0.581300188524055,0.0620747142958579,0,0.12729431655633,0,0,0.684466602170562,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.402547587182052,0 | |phase1_expression=2.90685406832891,6.63711624062048,0.704772020479856,5.00366491765652,3.12872766099101,4.36169262050184,5.06599756336621,3.15859936713415,7.05201196139564,0,0,0.436882744260345,0.263766978228454,0.74259811776028,0,0,2.41077811209591,0.730310090387373,0,0.246242116153576,0.204000691244253,1.56727360739044,0.85870796139317,0.958120975510189,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,1.50401373190767,3.18662341713812,0,1.45990461090791,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,2.58152958673932,0.709336764396714,0,0,0.74000264525148,0,0,0,0,0,0,0.312160076830321,0,0.597794722207204,0.469737994575059,0.161872944368132,0.561803226808994,0.408308342509787,0.491337269247072,0.413303124703062,4.75201142912821,2.47266929278557,0,0.718618141816238,0.168336113954066,0.250237039743928,0,1.31693286264251,3.0648779579902,1.20190447125277,0.113432183160021,0.89694817844431,2.77624605464138,1.27159140695737,0.600182192168805,1.13357782162283,0.257640540045629,0.930584281657949,0,1.36411807225678,0.757301322732344,1.38074847963449,0.969876340912871,1.42003837006646,1.81353776809752,0.847802961552438,0.193260853163297,0.272746120590835,0,0.487894824518382,0.265059536642971,1.16193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,3.21620469096443,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,3.57656445851882,0,0.531876233169741,2.08014873822732,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0,0.791951872933429,1.80863626235752,2.61460037580088,0.799783929456456,0,0,0,0,1.14861935834114,1.42636905040718,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,2.67643483195743,0.946214490203608,1.40569697991256,0.902838299183157,11.3703752027992,2.0694614258501,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0.303127571446259,0,0,1.24053903909388,0.306923946576125,3.92924132206303,0.640695746278505,1.53512174720011,0.64341568457443,2.96836132889982,0.616838775210622,4.79416658345443,1.23190734020714,0,1.97557643381931,0,0.200506470303285,0,0.574072240823034,0.728364672026868,2.22911505431021,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.676695028044854,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.623224249527161,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0.719489830333259,0,0.589062011728432,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,5.5148118461948,0,0,3.98063385144732,0.876901770507525,0,0,0.608731130888112,0,0,0.286822704408103,0.392996164052485,1.78335525740625,1.06428319221179,4.22215270595328,1.31717957183961,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,1.10513566212459,0,0,0,2.79935628895627,0,0,0,0,0,0,2.90799823828566,1.85536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0,0.295547618953547,1.75508317723178,0,0,0.461701551022782,0.341826167541004,0,0,0,0.31900115973192,2.83952539545773,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.313265848516366,0,0,1.87411556580271,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,1.20390222730132,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.379864775735272,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,1.76828463311521,1.51293380256957,1.66176135211674,0,0,0.242998226632099,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,7.77799342081141,2.28611152076586,0,0,0.170388021785422,0,0.146552233678082,0,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,1.58634144372552,0.250381861413,0,0.332787154610557,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.895528817321244,2.33713309847224,6.10286447652875,0.757612021100357,2.0125432140206,1.77962244319307,0,1.05861646634267,0.310874401165561,0.887130899937803,1.11507737014592,0,0.621051827505038,0.829412415681711,0.797525143673985,1.5652351854352,1.20206087197775,0,0.406870733204662,0.727394636810238,0.966695013382396,1.85613503951397,0.796191777397232,1.20008329398946,1.03018711554838,3.36749488765919,1.26184898228651,0.192619830407303,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.530067437837643,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.918736432059601,0.256916900385838,0,0,1.8460472781668,0.252071696221718,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0.405225507710368,1.56215619722769,0.206686796501184,0.126831620387814,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0,0,0.227662191351298,0.354809480650555,0,0.171488009437418,0.203909198930495,0.526182188502793,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.308696632431779,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0.509781344063451,0.563903507879121,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,1.42782129400921,0,0,1.85997509083376,1.84870251452567,2.59575937274273,0.126166424835079,0,0.126698501011437,0.713921808193872,0,0.459474497674225,0.250707539292375,2.1218035501107,0.535928260312357,0.829169439458779,0,0,0.23806443146374,0.581300188524055,0.0620747142958579,0,0.12729431655633,0,0,0.684466602170562,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.402547587182052,0 | ||
|short_description=p4@BC009328 | |||
}} | }} |
Latest revision as of 19:01, 23 July 2015
Short description: | p4@BC009328 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BC009328_5end |
Coexpression cluster: | C879_Osteoblast_Adipocyte_Olfactory_leiomyoma_Smooth_tenocyte_Fibroblast |
Association with transcript: | 67bp_to_BC009328_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.28e-14 | 15 |
fibroblast | 2.64e-09 | 76 |
stromal cell | 4.20e-08 | 28 |
subcutaneous fat cell | 4.35e-08 | 3 |
preadipocyte | 7.85e-08 | 12 |
GAG secreting cell | 8.09e-08 | 9 |
carbohydrate secreting cell | 8.09e-08 | 9 |
multi fate stem cell | 1.43e-07 | 427 |
stem cell | 3.02e-07 | 441 |
somatic stem cell | 3.05e-07 | 433 |
fibrocyte | 3.80e-07 | 3 |
tendon cell | 3.80e-07 | 3 |
mesenchymal cell | 5.47e-07 | 354 |
mesenchymal stem cell of adipose | 8.26e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.83e-17 | 14 |
hypodermis | 3.74e-08 | 5 |
subcutaneous adipose tissue | 4.35e-08 | 3 |
dense regular connective tissue | 3.80e-07 | 3 |
tendon | 3.80e-07 | 3 |
regular connective tissue | 3.80e-07 | 3 |