FFCP PHASE1:Hg19::chr11:12398049..12398057,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12398049..12398057,+ | |||
|description=CAGE_peak_at_chr11:12398049..12398057,+ | |description=CAGE_peak_at_chr11:12398049..12398057,+ | ||
|id=chr11:12398049..12398057,+ | |id=chr11:12398049..12398057,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.11e-10!12;CL:0000569!3.69e-09!4;CL:0000011!3.69e-09!4;CL:0000136!7.14e-09!15;CL:0000325!7.79e-09!39;CL:0000148!1.01e-08!10;CL:0000541!1.01e-08!10;CL:0002580!1.07e-07!3;CL:0002622!3.79e-07!3 | |ontology_enrichment_celltype=CL:0002334!2.11e-10!12;CL:0000569!3.69e-09!4;CL:0000011!3.69e-09!4;CL:0000136!7.14e-09!15;CL:0000325!7.79e-09!39;CL:0000148!1.01e-08!10;CL:0000541!1.01e-08!10;CL:0002580!1.07e-07!3;CL:0002622!3.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.43e-51;10!CL:0000147;1.15e-36;14!CL:0000710;1.23e-25;20!CL:0002567;3.65e-20;3!CL:0000075;5.98e-19;27!CL:0002566;7.45e-16;1!CL:0002077;3.98e-14;34!CL:0002540;2.64e-10;6!CL:0002617;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.24e-51,10;CL:0000541,2.24e-51,10;CL:0000147,1.08e-36,14;CL:0000710,1.18e-25,20;CL:0002567,3.01e-20,3;CL:0000075,5.80e-19,27;CL:0002566,7.46e-16,1;CL:0002077,5.14e-15,34;CL:0000333,8.06e-12,41;CL:0002540,2.41e-10,6;CL:0002617,2.87e-08,2;CL:0000133,3.05e-08,59;CL:0000221,9.83e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.27e-09!14 | |ontology_enrichment_disease=DOID:2394!6.27e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!2.20e-10!59;UBERON:0000990!2.20e-10!59;UBERON:0004458!1.38e-08!49;UBERON:0000162!1.45e-08!14;UBERON:0001353!1.45e-08!14;UBERON:0000163!1.45e-08!14;UBERON:0006866!1.45e-08!14;UBERON:0000164!1.45e-08!14;UBERON:0000931!1.45e-08!14;UBERON:0002323!3.45e-08!46;UBERON:0004457!3.70e-08!12;UBERON:0000042!3.70e-08!12;UBERON:0003134!4.07e-08!37;UBERON:0000474!4.07e-08!37;UBERON:0004122!6.78e-08!15;UBERON:0000992!2.82e-07!13;UBERON:0003100!5.19e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-10;6!UBERON:0002358;2.64e-10;6!UBERON:0003684;2.64e-10;6!UBERON:0001178;2.64e-10;6!UBERON:0004457;3.67e-07;9!UBERON:0000042;3.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.04e-10,6;UBERON:0002358,3.04e-10,6;UBERON:0003684,3.04e-10,6;UBERON:0001178,3.04e-10,6 | |||
|phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55588208036147,3.81988425558278,2.34434894420094,0,2.15937734676979,2.10240140490742,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.280660094433074,1.02511319404561,0,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,1.25783950876288,1.77962244319307,0.457680136793847,0.907385542579434,0.310874401165561,0.147855149989634,0.318593534327405,0.899606224327209,0.310525913752519,0,0,0,0.300515217994437,1.52322084867518,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=1.09007027562334,0.428201047781966,1.26858963686374,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55588208036147,3.81988425558278,2.34434894420094,0,2.15937734676979,2.10240140490742,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,0.767309866440312,0.280660094433074,1.02511319404561,0,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,1.25783950876288,1.77962244319307,0.457680136793847,0.907385542579434,0.310874401165561,0.147855149989634,0.318593534327405,0.899606224327209,0.310525913752519,0,0,0,0.300515217994437,1.52322084867518,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p@chr11:12398049..12398057,+ | |short_description=p@chr11:12398049..12398057,+ | ||
}} | }} |
Latest revision as of 19:29, 23 July 2015
Short description: | p@chr11:12398049..12398057, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12398049..12398057, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.24e-51 | 10 |
melanoblast | 2.24e-51 | 10 |
pigment cell | 1.08e-36 | 14 |
neurecto-epithelial cell | 1.18e-25 | 20 |
light melanocyte | 3.01e-20 | 3 |
columnar/cuboidal epithelial cell | 5.80e-19 | 27 |
dark melanocyte | 7.46e-16 | 1 |
ecto-epithelial cell | 5.14e-15 | 34 |
migratory neural crest cell | 8.06e-12 | 41 |
mesenchymal stem cell of the bone marrow | 2.41e-10 | 6 |
adipocyte of breast | 2.87e-08 | 2 |
neurectodermal cell | 3.05e-08 | 59 |
ectodermal cell | 9.83e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.04e-10 | 6 |
peritoneum | 3.04e-10 | 6 |
abdominal cavity | 3.04e-10 | 6 |
visceral peritoneum | 3.04e-10 | 6 |