FFCP PHASE1:Hg19::chr11:133815240..133815251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:133815240..133815251,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr11:133815240..133815251,- | |description=CAGE_peak_at_chr11:133815240..133815251,- | ||
|id=chr11:133815240..133815251,- | |id=chr11:133815240..133815251,- | ||
|ontology_enrichment_celltype=CL:0000791!9.64e-38!18;CL:0000789!9.64e-38!18;CL:0002420!9.64e-38!18;CL:0002419!9.64e-38!18;CL:0000790!9.64e-38!18;CL:0000084!7.32e-30!25;CL:0000827!7.32e-30!25;CL:0000625!8.38e-23!11;CL:0000624!2.10e-19!6;CL:0000838!6.39e-18!52;CL:0000542!1.72e-17!53;CL:0000051!1.72e-17!53;CL:0000898!1.14e-10!3;CL:0000623!2.49e-10!3;CL:0000825!2.49e-10!3;CL:0000738!4.84e-08!140;CL:0000815!2.03e-07!2;CL:0000792!2.03e-07!2;CL:0002677!2.03e-07!2;CL:0002087!9.02e-07!119 | |ontology_enrichment_celltype=CL:0000791!9.64e-38!18;CL:0000789!9.64e-38!18;CL:0002420!9.64e-38!18;CL:0002419!9.64e-38!18;CL:0000790!9.64e-38!18;CL:0000084!7.32e-30!25;CL:0000827!7.32e-30!25;CL:0000625!8.38e-23!11;CL:0000624!2.10e-19!6;CL:0000838!6.39e-18!52;CL:0000542!1.72e-17!53;CL:0000051!1.72e-17!53;CL:0000898!1.14e-10!3;CL:0000623!2.49e-10!3;CL:0000825!2.49e-10!3;CL:0000738!4.84e-08!140;CL:0000815!2.03e-07!2;CL:0000792!2.03e-07!2;CL:0002677!2.03e-07!2;CL:0002087!9.02e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.68e-16;18!CL:0000789;4.68e-16;18!CL:0002419;4.68e-16;18!CL:0000625;3.39e-12;11!CL:0000084;1.93e-11;25!CL:0000895;7.82e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.51e-16,18;CL:0000789,5.51e-16,18;CL:0002420,5.51e-16,18;CL:0002419,5.51e-16,18;CL:0000790,5.51e-16,18;CL:0000625,3.60e-12,11;CL:0000084,2.17e-11,25;CL:0000827,2.17e-11,25;CL:0000810,8.17e-10,1;CL:0000895,8.17e-10,1;CL:0002436,8.17e-10,1;CL:0002427,8.17e-10,1;CL:0002428,8.17e-10,1;CL:0002429,8.17e-10,1;CL:0002433,8.17e-10,1;CL:0002431,8.17e-10,1;CL:0002432,8.17e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000790;4.68e-16;18!CL:0002427;7.82e-10;1 | |||
|ontology_enrichment_disease=DOID:3493!7.46e-07!2 | |ontology_enrichment_disease=DOID:3493!7.46e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.35e-16!15;UBERON:0000179!3.35e-16!15;UBERON:0000463!3.35e-16!15 | |ontology_enrichment_uberon=UBERON:0000178!3.35e-16!15;UBERON:0000179!3.35e-16!15;UBERON:0000463!3.35e-16!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:133815240..133815251,- | |short_description=p@chr11:133815240..133815251,- | ||
}} | }} |
Latest revision as of 20:09, 23 July 2015
Short description: | p@chr11:133815240..133815251, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:133815240..133815251, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.51e-16 | 18 |
alpha-beta T cell | 5.51e-16 | 18 |
immature T cell | 5.51e-16 | 18 |
mature T cell | 5.51e-16 | 18 |
immature alpha-beta T cell | 5.51e-16 | 18 |
CD8-positive, alpha-beta T cell | 3.60e-12 | 11 |
T cell | 2.17e-11 | 25 |
pro-T cell | 2.17e-11 | 25 |
CD4-positive, alpha-beta thymocyte | 8.17e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.17e-10 | 1 |
mature CD4 single-positive thymocyte | 8.17e-10 | 1 |
resting double-positive thymocyte | 8.17e-10 | 1 |
double-positive blast | 8.17e-10 | 1 |
CD69-positive double-positive thymocyte | 8.17e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.17e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.17e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.17e-10 | 1 |