FFCP PHASE1:Hg19::chr11:46342310..46342321,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:46342310..46342321,+
|short_description=p@chr11:46342310..46342321,+
|description=CAGE_peak_at_chr11:46342310..46342321,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:46342310..46342321,+ | |||
|description=CAGE_peak_at_chr11:46342310..46342321,+ | |||
|id=chr11:46342310..46342321,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-35!180;CL:0000057!5.63e-26!75;CL:0000187!1.10e-13!54;CL:0000183!1.18e-13!59;CL:0000680!8.73e-13!57;CL:0000056!8.73e-13!57;CL:0000355!8.73e-13!57;CL:0000393!2.83e-12!60;CL:0000211!2.83e-12!60;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0002620!2.00e-11!23;CL:0002334!2.74e-09!12;CL:0000048!5.72e-08!430;CL:0000359!1.40e-07!32;CL:0000723!1.72e-07!436;CL:0000034!4.66e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.34e-12;12!CL:0002579;5.37e-09;3!CL:0002620;5.50e-09;23!CL:0000192;2.30e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.54e-16,76;CL:0002334,2.38e-12,12;CL:0002620,6.68e-09,23;CL:0000048,1.25e-08,427;CL:0002579,1.34e-08,3;CL:0000192,1.64e-08,43;CL:0000514,1.64e-08,43;CL:0000723,2.60e-08,433;CL:0000187,4.78e-08,55;CL:0000034,6.69e-08,441;CL:0000680,1.93e-07,58;CL:0000056,1.93e-07,58;CL:0000355,1.93e-07,58;CL:0000393,6.74e-07,61;CL:0000211,6.74e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.30e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.41e-08;5!DOID:450;3.41e-08;5!DOID:66;3.41e-08;5!DOID:423;3.41e-08;5!DOID:0080000;3.41e-08;5!DOID:11722;3.41e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.16e-07,5;DOID:450,1.16e-07,5;DOID:66,1.16e-07,5;DOID:423,1.16e-07,5;DOID:0080000,1.16e-07,5;DOID:11722,1.16e-07,5;DOID:3307,8.30e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.44e-13!83;UBERON:0002329!1.44e-13!83;UBERON:0003077!1.44e-13!83;UBERON:0003059!1.44e-13!83;UBERON:0007282!1.44e-13!83;UBERON:0009618!1.44e-13!83;UBERON:0007285!1.44e-13!83;UBERON:0005256!1.25e-12!143;UBERON:0004290!1.90e-12!70;UBERON:0002385!1.90e-12!63;UBERON:0001015!1.90e-12!63;UBERON:0000383!1.90e-12!63;UBERON:0001134!6.04e-12!61;UBERON:0002036!6.04e-12!61;UBERON:0003082!6.04e-12!61;UBERON:0000486!2.03e-09!82;UBERON:0003102!7.82e-09!95;UBERON:0002100!8.10e-09!216;UBERON:0000475!1.10e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.14e-07;6!UBERON:0002358;2.14e-07;6!UBERON:0003684;2.14e-07;6!UBERON:0001178;2.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.02e-07,62;UBERON:0002036,1.02e-07,62;UBERON:0003082,1.02e-07,62;UBERON:0002385,2.36e-07,64;UBERON:0001015,2.36e-07,64;UBERON:0000383,2.36e-07,64;UBERON:0002329,3.22e-07,71;UBERON:0003059,3.22e-07,71;UBERON:0007282,3.22e-07,71;UBERON:0004290,3.22e-07,71;UBERON:0009618,3.22e-07,71;UBERON:0007503,4.22e-07,78;UBERON:0003077,4.62e-07,72;UBERON:0007285,4.62e-07,72;UBERON:0003688,6.39e-07,6;UBERON:0002358,6.39e-07,6;UBERON:0003684,6.39e-07,6;UBERON:0001178,6.39e-07,6;UBERON:0007524,6.57e-07,73 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.704772020479856,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.245733936501509,0,1.52908960491121,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,2.19093027116212,1.46379839637152,0.123121058076788,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,0,1.15877215168659,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.886413581652058,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,1.72667283892012,0,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0,0.280901613404497,0.816616685019573,0.368502951935304,0.516628905878827,2.37600571456411,0.741800787835671,3.64064544775211,0.718618141816238,0.336672227908132,0.375355559615893,1.6623846929051,0.438977620880838,0.30648779579902,0.300476117813194,0,1.07633781413317,1.06778694409284,1.05965950579781,0.900273288253207,1.33968288009971,1.54584324027377,1.48893485065272,1.0126579934476,1.65642908774038,0.252433774244115,0.736399189138395,0.80823028409406,0.355009592516614,1.91428986632517,0.508681776931463,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.2933531432838,1.16344544182,7.15312891703765,0.845302752556,1.06375246633948,0,0.514414748524284,0,0.266422179016099,1.00084595560703,3.7983512377401,0.823240336780769,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.199945982364114,0,0,0,0.958499421966331,2.29723871668228,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.542530047399471,1.45579603071565,1.96271887676878,1.73472656537328,0.585707074963566,0.300946099727719,0,0,2.65690239414175,0.184369168541703,0.434418072340414,0.587403472388222,0,0,0,0,0,1.66435439510497,1.20956117331872,1.48864684691266,0.460385919864187,0.841980283299221,1.02511319404561,3.07024349440022,2.0911009748669,1.48418066444991,1.07946785661859,1.06537035187876,0.657017248110473,1.55776328755086,0.464841513839837,0.120859449591622,0,0,1.14814448164607,0.910455840033585,1.96686622439136,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,1.37354197227515,1.15513299888823,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.322260734604821,0.435050081742686,0.340906509664404,1.15741646340759,0,0,0,0,3.71876439437829,2.83331112147576,0,0.616067160352178,0,0,0.37064843820784,0,0,0,0.38126038784765,1.79128453917934,0.855877976067841,0.95460974377781,0.78494864019923,0.359744915166629,0.823611089208164,0.235624804691373,0,1.58510321173008,0,1.46290121726877,0.243713489631284,1.05650146756755,1.36499911407986,3.53513579884282,1.13008116620243,0,0.66343897524122,1.31535265576129,1.15755106853338,0.655894752046633,0.811641507850816,0.6196469961995,0.563391205064483,0.860468113224309,0.294747123039363,0.35667105148125,0,0.633322905892992,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0.409074730008619,0,0.622079175323615,0,0.358042349351218,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0.797594390929008,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.801588202515337,0.426905989478705,0,0,0,0,0,0,0,0.543616824294456,0.313808538937,0,0.577901179803038,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0.199679000498991,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0.528001682597033,0,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.597019211547496,1.16856654923612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| ||
|short_description=p@chr11:46342310..46342321,+ | |||
}} | }} |
Latest revision as of 22:25, 23 July 2015
Short description: | p@chr11:46342310..46342321, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46342310..46342321, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.54e-16 | 76 |
preadipocyte | 2.38e-12 | 12 |
skin fibroblast | 6.68e-09 | 23 |
multi fate stem cell | 1.25e-08 | 427 |
omentum preadipocyte | 1.34e-08 | 3 |
smooth muscle cell | 1.64e-08 | 43 |
smooth muscle myoblast | 1.64e-08 | 43 |
somatic stem cell | 2.60e-08 | 433 |
muscle cell | 4.78e-08 | 55 |
stem cell | 6.69e-08 | 441 |
muscle precursor cell | 1.93e-07 | 58 |
myoblast | 1.93e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.93e-07 | 58 |
electrically responsive cell | 6.74e-07 | 61 |
electrically active cell | 6.74e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.02e-07 | 62 |
striated muscle tissue | 1.02e-07 | 62 |
myotome | 1.02e-07 | 62 |
muscle tissue | 2.36e-07 | 64 |
musculature | 2.36e-07 | 64 |
musculature of body | 2.36e-07 | 64 |
somite | 3.22e-07 | 71 |
presomitic mesoderm | 3.22e-07 | 71 |
presumptive segmental plate | 3.22e-07 | 71 |
dermomyotome | 3.22e-07 | 71 |
trunk paraxial mesoderm | 3.22e-07 | 71 |
epithelial vesicle | 4.22e-07 | 78 |
paraxial mesoderm | 4.62e-07 | 72 |
presumptive paraxial mesoderm | 4.62e-07 | 72 |
omentum | 6.39e-07 | 6 |
peritoneum | 6.39e-07 | 6 |
abdominal cavity | 6.39e-07 | 6 |
visceral peritoneum | 6.39e-07 | 6 |
dense mesenchyme tissue | 6.57e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.16e-07 | 5 |
myotonic disease | 1.16e-07 | 5 |
muscle tissue disease | 1.16e-07 | 5 |
myopathy | 1.16e-07 | 5 |
muscular disease | 1.16e-07 | 5 |
myotonic dystrophy | 1.16e-07 | 5 |
teratoma | 8.30e-07 | 2 |