FFCP PHASE1:Hg19::chr11:56657802..56657808,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:56657802..56657808,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr11:56657802..56657808,+ | |description=CAGE_peak_at_chr11:56657802..56657808,+ | ||
|id=chr11:56657802..56657808,+ | |id=chr11:56657802..56657808,+ | ||
|ontology_enrichment_celltype=CL:0002166!1.43e-21!3;CL:0002621!1.96e-21!3;CL:0002159!2.27e-19!13;CL:0000317!3.71e-09!2;CL:1000448!3.71e-09!2;CL:0002308!3.71e-09!2;CL:0002140!3.71e-09!2;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2;CL:0000362!1.01e-08!8;CL:0002077!8.32e-08!33 | |ontology_enrichment_celltype=CL:0002166!1.43e-21!3;CL:0002621!1.96e-21!3;CL:0002159!2.27e-19!13;CL:0000317!3.71e-09!2;CL:1000448!3.71e-09!2;CL:0002308!3.71e-09!2;CL:0002140!3.71e-09!2;CL:0001014!6.42e-09!2;CL:0001016!6.42e-09!2;CL:0000362!1.01e-08!8;CL:0002077!8.32e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0000317;7.14e-26;2!CL:1000448;7.14e-26;2!CL:0002308;7.14e-26;2!CL:0002140;7.14e-26;2!CL:0002166;9.45e-18;3!CL:0002621;9.45e-18;3!CL:0002159;3.66e-15;14!CL:0000622;3.26e-11;5!CL:0000154;1.44e-09;6!CL:0000150;8.37e-07;9!CL:0000362;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.56e-26,2;CL:1000448,5.56e-26,2;CL:0002308,5.56e-26,2;CL:0002140,5.56e-26,2;CL:0002166,9.46e-18,3;CL:0002621,1.12e-17,3;CL:0002159,3.41e-15,14;CL:0000622,2.94e-11,5;CL:0000154,1.32e-09,6;CL:0002077,7.16e-07,34;CL:0000150,7.91e-07,9;CL:0000362,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!1.96e-21!3;UBERON:0001708!1.93e-16!4;UBERON:0001704!1.93e-16!4;UBERON:0002090!2.76e-11!6;UBERON:0002419!3.71e-09!2;UBERON:0007771!3.71e-09!2;UBERON:0003297!3.71e-09!2;UBERON:0001821!3.71e-09!2;UBERON:0003487!3.71e-09!2;UBERON:0001820!3.71e-09!2;UBERON:0005089!3.71e-09!2;UBERON:0005088!3.71e-09!2;UBERON:0001828!1.22e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.14e-26;2!UBERON:0007771;7.14e-26;2!UBERON:0003297;7.14e-26;2!UBERON:0001821;7.14e-26;2!UBERON:0003487;7.14e-26;2!UBERON:0001820;7.14e-26;2!UBERON:0001949;9.45e-18;3!UBERON:0001708;1.13e-13;4!UBERON:0008895;1.13e-13;4!UBERON:0011159;3.26e-11;5!UBERON:0003929;2.18e-08;7!UBERON:0010371;1.21e-07;31!UBERON:0003350;1.69e-07;8!UBERON:0001828;1.69e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.56e-26,2;UBERON:0007771,5.56e-26,2;UBERON:0003297,5.56e-26,2;UBERON:0001821,5.56e-26,2;UBERON:0003487,5.56e-26,2;UBERON:0001820,5.56e-26,2;UBERON:0005089,5.56e-26,2;UBERON:0005088,5.56e-26,2;UBERON:0001949,1.12e-17,3;UBERON:0001708,1.13e-13,4;UBERON:0008895,1.13e-13,4;UBERON:0011159,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0003350,1.80e-07,8;UBERON:0001828,1.80e-07,8 | |||
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|short_description=p@chr11:56657802..56657808,+ | |short_description=p@chr11:56657802..56657808,+ | ||
}} | }} |
Latest revision as of 22:51, 23 July 2015
Short description: | p@chr11:56657802..56657808, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:56657802..56657808, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.56e-26 | 2 |
epithelial cell of sweat gland | 5.56e-26 | 2 |
epithelial cell of skin gland | 5.56e-26 | 2 |
acinar cell of sebaceous gland | 5.56e-26 | 2 |
epithelial cell of Malassez | 9.46e-18 | 3 |
gingival epithelial cell | 1.12e-17 | 3 |
general ecto-epithelial cell | 3.41e-15 | 14 |
acinar cell | 2.94e-11 | 5 |
protein secreting cell | 1.32e-09 | 6 |
ecto-epithelial cell | 7.16e-07 | 34 |
glandular epithelial cell | 7.91e-07 | 9 |
epidermal cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.56e-26 | 2 |
epidermis gland | 5.56e-26 | 2 |
gland of integumental system | 5.56e-26 | 2 |
sebaceous gland | 5.56e-26 | 2 |
skin sebaceous gland | 5.56e-26 | 2 |
sweat gland | 5.56e-26 | 2 |
sweat gland placode | 5.56e-26 | 2 |
sebaceous gland placode | 5.56e-26 | 2 |
gingival epithelium | 1.12e-17 | 3 |
jaw skeleton | 1.13e-13 | 4 |
splanchnocranium | 1.13e-13 | 4 |
primary subdivision of cranial skeletal system | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
epithelium of mucosa | 1.80e-07 | 8 |
gingiva | 1.80e-07 | 8 |