FFCP PHASE1:Hg19::chr11:90285400..90285405,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:90285400..90285405,+ | |||
|coexpression_cluster_id=C415 | |||
|description=CAGE_peak_at_chr11:90285400..90285405,+ | |||
|id=chr11:90285400..90285405,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.16e-08!24;CL:0000826!2.16e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.40e-14;1!CL:0000819;1.40e-14;1!CL:0002097;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.23e-14,1;CL:0002097,4.38e-08,2;CL:0000785,5.74e-08,2;CL:0000955,5.74e-08,2;CL:0000818,5.74e-08,2;CL:0000954,5.74e-08,2;CL:0000816,5.74e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000954;6.14e-08;2 | |||
|ontology_enrichment_disease=DOID:171!2.81e-07!10;DOID:162!7.50e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.40e-14;1!DOID:0050619;1.40e-14;1!DOID:0060073;1.40e-14;1!DOID:0070004;1.40e-14;1!DOID:8675;1.40e-14;1!DOID:1357;1.40e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.07e-14,1;DOID:0070004,1.07e-14,1;DOID:0060073,1.23e-14,1;DOID:8675,1.23e-14,1;DOID:0050619,1.84e-14,1;DOID:1357,1.84e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.40e-14;1!UBERON:0001764;1.40e-14;1!UBERON:0002426;1.40e-14;1!UBERON:0003831;1.40e-14;1!UBERON:0003898;1.40e-14;1!UBERON:0004830;1.40e-14;1!UBERON:0001825;1.40e-14;1!UBERON:0003830;1.40e-14;1!UBERON:0005175;1.40e-14;1!UBERON:0001774;1.40e-14;1!UBERON:0001103;1.40e-14;1!UBERON:0002346;1.97e-14;4!UBERON:0000923;1.97e-14;4!UBERON:0010316;1.97e-14;4!UBERON:0005291;1.97e-14;4!UBERON:0002050;9.76e-12;5!UBERON:0005423;9.76e-12;5!UBERON:0005090;6.14e-08;2!UBERON:0001630;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,8.17e-15,1;UBERON:0003831,8.17e-15,1;UBERON:0003898,8.17e-15,1;UBERON:0004830,8.17e-15,1;UBERON:0003830,8.17e-15,1;UBERON:0005175,8.17e-15,1;UBERON:0001774,8.17e-15,1;UBERON:0001103,8.17e-15,1;UBERON:0010084,8.17e-15,1;UBERON:0001764,1.84e-14,1;UBERON:0001825,1.84e-14,1;UBERON:0007195,2.75e-14,1;UBERON:0005090,4.69e-08,2;UBERON:0001630,4.69e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,1.05836791361941,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0.498635045700469,0,0,0,0,0.476809736941136,0,0.652931232636591,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0,0,1.60515529459758,0,1.27718352450966,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.236349546921671,0,0.13480708770837,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0.487170393523584,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,1.37771983728653,0,0,0,0,0.383683113910955,0,0,0.109209638192014,8.65635902765529,0.637724760305049,1.48722917110803,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0.102662806856247,0,0.485710993059139,0,1.19370465096821,0,0.22589216407792,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0,0,0.178553938605658,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0,0,0,0.267964130156178,0,0,0,0,0,0,1.90624166387043,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:90285400..90285405,+ | |||
}} |
Latest revision as of 03:28, 24 July 2015
Short description: | p@chr11:90285400..90285405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:90285400..90285405, + |
Coexpression cluster: | C415_neuroectodermal_eye_retina_thyroid_acute_adult_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.23e-14 | 1 |
cortical cell of adrenal gland | 4.38e-08 | 2 |
mature B cell | 5.74e-08 | 2 |
pre-B-II cell | 5.74e-08 | 2 |
transitional stage B cell | 5.74e-08 | 2 |
small pre-B-II cell | 5.74e-08 | 2 |
immature B cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 8.17e-15 | 1 |
respiratory system muscle | 8.17e-15 | 1 |
skeletal muscle of trunk | 8.17e-15 | 1 |
respiratory system skeletal muscle | 8.17e-15 | 1 |
thoracic segment muscle | 8.17e-15 | 1 |
chest organ | 8.17e-15 | 1 |
muscle of trunk | 8.17e-15 | 1 |
diaphragm | 8.17e-15 | 1 |
future diaphragm | 8.17e-15 | 1 |
maxillary sinus | 1.84e-14 | 1 |
paranasal sinus | 1.84e-14 | 1 |
stroma of bone marrow | 2.75e-14 | 1 |
muscle structure | 4.69e-08 | 2 |
muscle organ | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.07e-14 | 1 |
myeloma | 1.07e-14 | 1 |
lymphatic system cancer | 1.23e-14 | 1 |
lymphosarcoma | 1.23e-14 | 1 |
paranasal sinus cancer | 1.84e-14 | 1 |
maxillary sinus cancer | 1.84e-14 | 1 |