FFCP PHASE1:Hg19::chr11:96012396..96012401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:96012396..96012401,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr11:96012396..96012401,- | |description=CAGE_peak_at_chr11:96012396..96012401,- | ||
|id=chr11:96012396..96012401,- | |id=chr11:96012396..96012401,- | ||
|ontology_enrichment_celltype=CL:0002087!1.17e-09!119;CL:0002009!5.90e-09!65;CL:0002194!4.71e-08!63;CL:0000576!4.71e-08!63;CL:0000040!4.71e-08!63;CL:0000559!4.71e-08!63;CL:0000738!5.28e-08!140;CL:0002031!9.50e-08!124;CL:0002057!1.18e-07!42;CL:0000557!3.59e-07!71 | |ontology_enrichment_celltype=CL:0002087!1.17e-09!119;CL:0002009!5.90e-09!65;CL:0002194!4.71e-08!63;CL:0000576!4.71e-08!63;CL:0000040!4.71e-08!63;CL:0000559!4.71e-08!63;CL:0000738!5.28e-08!140;CL:0002031!9.50e-08!124;CL:0002057!1.18e-07!42;CL:0000557!3.59e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.03e-12;6!CL:0000898;1.51e-11;3!CL:0000895;2.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.03e-12,6;CL:0000898,1.51e-11,3;CL:0000810,3.53e-09,1;CL:0000895,3.53e-09,1;CL:0002436,3.53e-09,1;CL:0002427,3.53e-09,1;CL:0002428,3.53e-09,1;CL:0002429,3.53e-09,1;CL:0002433,3.53e-09,1;CL:0002431,3.53e-09,1;CL:0002432,3.53e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002427;2.76e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.92e-09!102;UBERON:0003061!5.92e-09!102;UBERON:0002193!8.27e-09!112 | |ontology_enrichment_uberon=UBERON:0002390!5.92e-09!102;UBERON:0003061!5.92e-09!102;UBERON:0002193!8.27e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.76e-09;1!UBERON:0006518;2.76e-09;1!UBERON:0008949;2.76e-09;1!UBERON:0000101;2.76e-09;1!UBERON:0002167;2.76e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.55e-09,1;UBERON:0006518,2.55e-09,1;UBERON:0008949,2.55e-09,1;UBERON:0000101,2.55e-09,1;UBERON:0002167,2.55e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0.671746422719773,0,0.257575567634187,0.872389432677388,0.377875943688809,0.485168122375632,1.16214518452842,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.47296445977717,0,0,0,0.376484679085209,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,2.61188314765726,1.70215567407342,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.736555271975129,2.21523671208619,0,0.212604299965044,0,0.112328631146495,0.450530678524519,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.590129310341499,3.14408610199332,0.205601498999509,0,1.30368906653436,2.8406868344084,1.94826728407911,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.260118695119756,0.657751618414705,0.829050053357545,0.579606171470105,1.77943875794473,1.33770414044857,1.04535523804977,0.226618685395132,1.14966148080576,1.37450978193052,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0.847727604638247,0.900273288253207,0.103052529238439,1.03056216018252,0,0.168776332241266,0.0974370051611986,1.00973509697646,0.368199594569197,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.951270761172991,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,4.21667878966063,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,11.966458368161,0,0,0,0,0.831883446123229,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.460511024178389,0.413509717453592,0.214840489736547,0.870100163485371,0.340906509664404,0,0,0,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,1.23408681925858,0.648473311192717,0,0.79312517629427,0,0,0,0.371606350251437,0.144269212976445,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0.748562161632879,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0,0.494411622680279,0.844501632511974,0.398495976502139,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0.179515288819544,0.325942115766024,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0.37950746544837,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.208843899010911,0.134802265961354,0,0.234264445725339,0,0,0.485560759068186,0.394584402849391,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.51595809741485,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0.586654148204409,0,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0,0.196854963029498,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0.449947783103001,0.77380195455795,0.121499113316049,0,0,0,0.105600336519406,0,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0.258565912723101,0.13223260174269,0,0,0.213574825135389,0,1.24271716604159,0,0,0.243585196761792,0,0,0.2506898940227,0,0,0.471162288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| ||
|short_description=p@chr11:96012396..96012401,- | |short_description=p@chr11:96012396..96012401,- | ||
}} | }} |
Latest revision as of 03:48, 24 July 2015
Short description: | p@chr11:96012396..96012401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:96012396..96012401, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.03e-12 | 6 |
naive T cell | 1.51e-11 | 3 |
CD4-positive, alpha-beta thymocyte | 3.53e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.53e-09 | 1 |
mature CD4 single-positive thymocyte | 3.53e-09 | 1 |
resting double-positive thymocyte | 3.53e-09 | 1 |
double-positive blast | 3.53e-09 | 1 |
CD69-positive double-positive thymocyte | 3.53e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.53e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.53e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.53e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.55e-09 | 1 |
right lung lobe | 2.55e-09 | 1 |
lower lobe of lung | 2.55e-09 | 1 |
lobe of lung | 2.55e-09 | 1 |
right lung | 2.55e-09 | 1 |