FFCP PHASE1:Hg19::chr12:4381997..4382005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:4381997..4382005,+ | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_at_chr12:4381997..4382005,+ | |description=CAGE_peak_at_chr12:4381997..4382005,+ | ||
|id=chr12:4381997..4382005,+ | |id=chr12:4381997..4382005,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.62e-10!52;CL:0000542!6.83e-10!53;CL:0000051!6.83e-10!53;CL:0000068!2.07e-08!3;CL:0000069!2.07e-08!3;CL:0000307!2.07e-08!3;CL:0000377!2.07e-08!3;CL:0002368!2.28e-08!13;CL:0002202!6.74e-07!9;CL:0002632!6.74e-07!9 | |ontology_enrichment_celltype=CL:0000838!3.62e-10!52;CL:0000542!6.83e-10!53;CL:0000051!6.83e-10!53;CL:0000068!2.07e-08!3;CL:0000069!2.07e-08!3;CL:0000307!2.07e-08!3;CL:0000377!2.07e-08!3;CL:0002368!2.28e-08!13;CL:0002202!6.74e-07!9;CL:0002632!6.74e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-13;2!CL:0000307;1.41e-09;3!CL:0002319;6.23e-09;25!CL:0000243;8.84e-07;15!CL:0000125;8.84e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0002319,6.76e-09,25;CL:0000243,9.65e-07,15;CL:0000125,9.65e-07,15;CL:0000030,9.65e-07,15;CL:0000339,9.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;6.99e-21;10!CL:0000377;1.41e-09;3!UBERON:0003056;1.41e-09;3!CL:0000339;8.84e-07;15 | |||
|ontology_enrichment_disease=DOID:2531!6.44e-08!51;DOID:0060083!6.44e-08!51 | |ontology_enrichment_disease=DOID:2531!6.44e-08!51;DOID:0060083!6.44e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.13e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.55e-09,11 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001016;7.50e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.09e-07,81;UBERON:0001016,5.97e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.91227394607833,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,1.24513771442608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,5.57473404450323,0,0.801652215796681,0.918948995348449,1.50424523575425,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.314843125254717,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.91227394607833,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,1.24513771442608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,5.57473404450323,0,0.801652215796681,0.918948995348449,1.50424523575425,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0.320568492303233 | ||
|short_description=p@chr12:4381997..4382005,+ | |short_description=p@chr12:4381997..4382005,+ | ||
}} | }} |
Latest revision as of 08:29, 24 July 2015
Short description: | p@chr12:4381997..4382005, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4381997..4382005, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
neural cell | 6.76e-09 | 25 |
glial cell (sensu Vertebrata) | 9.65e-07 | 15 |
glial cell | 9.65e-07 | 15 |
glioblast | 9.65e-07 | 15 |
glioblast (sensu Vertebrata) | 9.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.09e-07 | 81 |
nervous system | 5.97e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.55e-09 | 11 |