FFCP PHASE1:Hg19::chr12:53200931..53200932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53200931..53200932,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr12:53200931..53200932,- | |description=CAGE_peak_at_chr12:53200931..53200932,- | ||
|id=chr12:53200931..53200932,- | |id=chr12:53200931..53200932,- | ||
|ontology_enrichment_celltype=CL:0000322!9.90e-11!3 | |ontology_enrichment_celltype=CL:0000322!9.90e-11!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.42e-195;1 | |||
|ontology_enrichment_disease=DOID:3910!2.05e-15!2;DOID:3908!6.04e-07!5 | |ontology_enrichment_disease=DOID:3910!2.05e-15!2;DOID:3908!6.04e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!6.36e-57!2;UBERON:0001723!1.23e-38!3;UBERON:0001033!1.23e-38!3;UBERON:0010056!1.23e-38!3;UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0001042!4.66e-26!10;UBERON:0009145!4.66e-26!10;UBERON:0006562!9.02e-24!11;UBERON:0004903!2.05e-15!2;UBERON:0002173!2.05e-15!2;UBERON:0002186!2.05e-15!2;UBERON:0000078!7.52e-15!18;UBERON:0001557!4.14e-14!19;UBERON:0000166!7.73e-13!21;UBERON:0000974!2.66e-12!10;UBERON:0004821!9.90e-11!3;UBERON:0003215!9.90e-11!3;UBERON:0002299!9.90e-11!3;UBERON:0006524!9.90e-11!3;UBERON:0008874!9.90e-11!3;UBERON:0002169!9.90e-11!3;UBERON:0004894!9.90e-11!3;UBERON:0000072!2.51e-10!46;UBERON:0000165!8.29e-10!28;UBERON:0000930!8.29e-10!28;UBERON:0000065!5.04e-09!53;UBERON:0008814!1.42e-08!15;UBERON:0001043!1.70e-08!4;UBERON:0009143!1.70e-08!4;UBERON:0000161!5.59e-08!35;UBERON:0001041!1.51e-07!98;UBERON:0001004!9.47e-07!72 | |ontology_enrichment_uberon=UBERON:0000341!6.36e-57!2;UBERON:0001723!1.23e-38!3;UBERON:0001033!1.23e-38!3;UBERON:0010056!1.23e-38!3;UBERON:0002372!4.20e-29!1;UBERON:0001961!4.20e-29!1;UBERON:0001744!4.20e-29!1;UBERON:0001735!4.20e-29!1;UBERON:0001042!4.66e-26!10;UBERON:0009145!4.66e-26!10;UBERON:0006562!9.02e-24!11;UBERON:0004903!2.05e-15!2;UBERON:0002173!2.05e-15!2;UBERON:0002186!2.05e-15!2;UBERON:0000078!7.52e-15!18;UBERON:0001557!4.14e-14!19;UBERON:0000166!7.73e-13!21;UBERON:0000974!2.66e-12!10;UBERON:0004821!9.90e-11!3;UBERON:0003215!9.90e-11!3;UBERON:0002299!9.90e-11!3;UBERON:0006524!9.90e-11!3;UBERON:0008874!9.90e-11!3;UBERON:0002169!9.90e-11!3;UBERON:0004894!9.90e-11!3;UBERON:0000072!2.51e-10!46;UBERON:0000165!8.29e-10!28;UBERON:0000930!8.29e-10!28;UBERON:0000065!5.04e-09!53;UBERON:0008814!1.42e-08!15;UBERON:0001043!1.70e-08!4;UBERON:0009143!1.70e-08!4;UBERON:0000161!5.59e-08!35;UBERON:0001041!1.51e-07!98;UBERON:0001004!9.47e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;2.39e-66;3!UBERON:0001041;1.43e-15;14!UBERON:0005181;4.53e-08;35!UBERON:0004921;2.32e-07;33!UBERON:0005178;2.32e-07;34!UBERON:0002224;2.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,2.39e-66,3;UBERON:0009143,2.39e-66,3;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35 | |||
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|short_description=p@chr12:53200931..53200932,- | |short_description=p@chr12:53200931..53200932,- | ||
}} | }} | ||
Latest revision as of 09:40, 24 July 2015
| Short description: | p@chr12:53200931..53200932, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr12:53200931..53200932, - |
| Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| esophagus | 2.39e-66 | 3 |
| esophageal region | 2.39e-66 | 3 |
| thoracic cavity element | 2.74e-07 | 34 |
| thoracic cavity | 2.74e-07 | 34 |
| thoracic segment organ | 4.03e-07 | 35 |