FFCP PHASE1:Hg19::chr12:68619586..68619593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55801 | |EntrezGene=entrezgene:55801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17119 | |HGNC=HGNC:17119 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9NPH9 | |UniProt=uniprot:Q9NPH9 | ||
|association_with_transcript=7bp_to_ENST00000229134_5end | |association_with_transcript=7bp_to_ENST00000229134_5end | ||
|cluster_id=chr12:68619586..68619593,- | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_1_at_IL26_5end | |description=CAGE_peak_1_at_IL26_5end | ||
Revision as of 11:40, 24 July 2015
| Short description: | p1@IL26 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_IL26_5end |
| Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
| Association with transcript: | 7bp_to_ENST00000229134_5end |
| EntrezGene: | 55801 |
| HGNC: | 17119 |
| UniProt: | Q9NPH9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@IL26 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD4-positive, alpha-beta thymocyte | 1.07e-11 | 1 |
| naive thymus-derived CD4-positive, alpha-beta T cell | 1.07e-11 | 1 |
| mature CD4 single-positive thymocyte | 1.07e-11 | 1 |
| resting double-positive thymocyte | 1.07e-11 | 1 |
| double-positive blast | 1.07e-11 | 1 |
| CD69-positive double-positive thymocyte | 1.07e-11 | 1 |
| CD69-positive, CD4-positive single-positive thymocyte | 1.07e-11 | 1 |
| CD4-positive, CD8-intermediate double-positive thymocyte | 1.07e-11 | 1 |
| CD24-positive, CD4 single-positive thymocyte | 1.07e-11 | 1 |
| GAG secreting cell | 5.20e-11 | 9 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| intralobular bile duct | 4.53e-12 | 1 |
| acinus | 4.53e-12 | 1 |
| intrahepatic bile duct | 4.53e-12 | 1 |
| portal lobule | 4.53e-12 | 1 |
| hepatic acinus | 4.53e-12 | 1 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| non-Hodgkin lymphoma | 2.63e-12 | 1 |
| cutaneous T cell lymphoma | 2.63e-12 | 1 |
| mycosis fungoides | 2.63e-12 | 1 |
Showing 1 to 3 of 3 entries
