FFCP PHASE1:Hg19::chr12:76377799..76377810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000552856_5end | |association_with_transcript=-4bp_to_ENST00000552856_5end | ||
|cluster_id=chr12:76377799..76377810,- | |||
|description=CAGE_peak_1_at_ENST00000552856_5end | |description=CAGE_peak_1_at_ENST00000552856_5end | ||
|id=chr12:76377799..76377810,- | |id=chr12:76377799..76377810,- | ||
|ontology_enrichment_celltype=CL:0002076!1.28e-16!43;CL:0000223!1.51e-14!59;CL:0000066!6.16e-10!254;CL:0002251!2.78e-09!21;CL:1000415!1.50e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.28e-16!43;CL:0000223!1.51e-14!59;CL:0000066!6.16e-10!254;CL:0002251!2.78e-09!21;CL:1000415!1.50e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.59e-23;1 | |||
|ontology_enrichment_disease=DOID:305!6.59e-12!106;DOID:0050687!3.72e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.09e-23;1!DOID:1357;2.09e-23;1!DOID:1749;9.29e-15;14!DOID:4929;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.67e-23,1;DOID:1357,1.67e-23,1;DOID:1749,8.46e-15,14;DOID:4929,1.48e-12,2;DOID:305,1.82e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.45e-14!169;UBERON:0000925!2.45e-14!169;UBERON:0006595!2.45e-14!169;UBERON:0001007!5.90e-14!155;UBERON:0001555!5.90e-14!155;UBERON:0007026!5.90e-14!155;UBERON:0004921!7.79e-11!129;UBERON:0004185!7.79e-11!129;UBERON:0000077!9.13e-11!130;UBERON:0000161!8.09e-10!35;UBERON:0005911!2.49e-09!82;UBERON:0002294!2.04e-08!7;UBERON:0001173!2.04e-08!7;UBERON:0004912!2.04e-08!7;UBERON:0003929!7.25e-08!54;UBERON:0001004!9.66e-08!72;UBERON:0001041!1.06e-07!98;UBERON:0000166!1.51e-07!21;UBERON:0000344!4.00e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.07e-23;1!UBERON:0003703;1.07e-23;1!UBERON:0001174;1.07e-23;1!UBERON:0004914;1.07e-23;1!UBERON:0001764;2.09e-23;1!UBERON:0001825;2.09e-23;1!UBERON:0000997;4.59e-23;1!UBERON:0005056;4.59e-23;1!UBERON:0004176;4.59e-23;1!UBERON:0002394;4.86e-23;4!UBERON:0003928;4.86e-23;4!UBERON:0002294;1.27e-13;7!UBERON:0001173;1.27e-13;7!UBERON:0000058;7.91e-10;10!UBERON:0002114;8.31e-09;2!UBERON:0001043;1.35e-08;3!UBERON:0001041;2.90e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.07e-23,1;UBERON:0003703,1.07e-23,1;UBERON:0001174,1.07e-23,1;UBERON:0004914,1.07e-23,1;UBERON:0001764,1.67e-23,1;UBERON:0001825,1.67e-23,1;UBERON:0000997,3.28e-23,1;UBERON:0005056,3.28e-23,1;UBERON:0002394,1.05e-15,6;UBERON:0003928,1.05e-15,6;UBERON:0002294,8.37e-11,9;UBERON:0001173,8.37e-11,9;UBERON:0004912,8.37e-11,9;UBERON:0002114,8.31e-09,2;UBERON:0001043,1.51e-08,3;UBERON:0009143,1.51e-08,3 | |||
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| ||
|short_description=p1@ENST00000552856 | |short_description=p1@ENST00000552856 | ||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p1@ENST00000552856 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000552856_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000552856_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.07e-23 | 1 |
extrahepatic bile duct | 1.07e-23 | 1 |
common bile duct | 1.07e-23 | 1 |
duodenal papilla | 1.07e-23 | 1 |
maxillary sinus | 1.67e-23 | 1 |
paranasal sinus | 1.67e-23 | 1 |
mammalian vulva | 3.28e-23 | 1 |
external female genitalia | 3.28e-23 | 1 |
bile duct | 1.05e-15 | 6 |
digestive system duct | 1.05e-15 | 6 |
biliary system | 8.37e-11 | 9 |
biliary tree | 8.37e-11 | 9 |
biliary bud | 8.37e-11 | 9 |
duodenum | 8.31e-09 | 2 |
esophagus | 1.51e-08 | 3 |
esophageal region | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.67e-23 | 1 |
maxillary sinus cancer | 1.67e-23 | 1 |
squamous cell carcinoma | 8.46e-15 | 14 |
tubular adenocarcinoma | 1.48e-12 | 2 |
carcinoma | 1.82e-07 | 106 |