FFCP PHASE1:Hg19::chr12:86197182..86197191,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:86197182..86197191,- | |||
|coexpression_cluster_id=C264 | |coexpression_cluster_id=C264 | ||
|description=CAGE_peak_at_chr12:86197182..86197191,- | |description=CAGE_peak_at_chr12:86197182..86197191,- | ||
|id=chr12:86197182..86197191,- | |id=chr12:86197182..86197191,- | ||
|ontology_enrichment_celltype=CL:0000223!1.92e-08!59 | |ontology_enrichment_celltype=CL:0000223!1.92e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002586;9.45e-18;3!CL:0000149;1.13e-13;4!CL:0002570;1.69e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.00e-18,3;CL:0000149,1.00e-13,4;CL:0002570,1.80e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.90e-09!6;UBERON:0002358!3.90e-09!6;UBERON:0003684!3.90e-09!6;UBERON:0001178!3.90e-09!6 | |ontology_enrichment_uberon=UBERON:0003688!3.90e-09!6;UBERON:0002358!3.90e-09!6;UBERON:0003684!3.90e-09!6;UBERON:0001178!3.90e-09!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;9.45e-18;3!UBERON:0001782;9.45e-18;3!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,8.00e-18,3;UBERON:0005424,8.00e-18,3;UBERON:0001781,1.00e-13,4;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.937285727335186,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62689197332152,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0.693373365065693,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,4.60975353562079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0.889811221596536,0.686520205190771,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0.928067519756987,0.398095888698616,0,0,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.937285727335186,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.185176890317059,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62689197332152,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.576570202095319,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0.693373365065693,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,4.60975353562079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.303298235083296,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0,0.889811221596536,0.686520205190771,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0.928067519756987,0.398095888698616,0,0,0,0,0,0,1.30497145982606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr12:86197182..86197191,- | |short_description=p@chr12:86197182..86197191,- | ||
}} | }} |
Latest revision as of 13:05, 24 July 2015
Short description: | p@chr12:86197182..86197191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:86197182..86197191, - |
Coexpression cluster: | C264_giant_keratoacanthoma_colon_fibrosarcoma_HES3GFP_Hep2_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.00e-18 | 3 |
visual pigment cell | 1.00e-13 | 4 |
mesenchymal stem cell of adipose | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 8.00e-18 | 3 |
presumptive retinal pigmented epithelium | 8.00e-18 | 3 |
layer of retina | 1.00e-13 | 4 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |