FFCP PHASE1:Hg19::chr12:92521923..92521946,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:92521923..92521946,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr12:92521923..92521946,- | |description=CAGE_peak_at_chr12:92521923..92521946,- | ||
|id=chr12:92521923..92521946,- | |id=chr12:92521923..92521946,- | ||
|ontology_enrichment_celltype=CL:0002087!1.34e-19!119;CL:0000738!1.34e-17!140;CL:0002031!7.46e-17!124;CL:0000838!1.56e-16!52;CL:0000542!5.00e-16!53;CL:0000051!5.00e-16!53;CL:0000037!3.52e-15!172;CL:0000566!3.52e-15!172;CL:0002032!3.68e-14!165;CL:0000837!3.68e-14!165;CL:0000988!2.63e-13!182;CL:0000084!2.04e-12!25;CL:0000827!2.04e-12!25;CL:0000791!1.99e-11!18;CL:0000789!1.99e-11!18;CL:0002420!1.99e-11!18;CL:0002419!1.99e-11!18;CL:0000790!1.99e-11!18;CL:0000624!5.30e-09!6 | |ontology_enrichment_celltype=CL:0002087!1.34e-19!119;CL:0000738!1.34e-17!140;CL:0002031!7.46e-17!124;CL:0000838!1.56e-16!52;CL:0000542!5.00e-16!53;CL:0000051!5.00e-16!53;CL:0000037!3.52e-15!172;CL:0000566!3.52e-15!172;CL:0002032!3.68e-14!165;CL:0000837!3.68e-14!165;CL:0000988!2.63e-13!182;CL:0000084!2.04e-12!25;CL:0000827!2.04e-12!25;CL:0000791!1.99e-11!18;CL:0000789!1.99e-11!18;CL:0002420!1.99e-11!18;CL:0002419!1.99e-11!18;CL:0000790!1.99e-11!18;CL:0000624!5.30e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.45e-13;18!CL:0000789;1.45e-13;18!CL:0002419;1.45e-13;18!CL:0000624;3.19e-11;6!CL:0000775;9.15e-11;3!CL:0000623;1.54e-10;3!CL:0000226;4.94e-10;3!CL:0000842;4.94e-10;3!CL:0000542;6.87e-10;53!CL:0000084;1.28e-09;25!CL:0002087;3.30e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.94e-17,52;CL:0000542,6.86e-17,53;CL:0000051,6.86e-17,53;CL:0000738,1.67e-16,136;CL:0002087,7.43e-16,115;CL:0000791,1.41e-13,18;CL:0000789,1.41e-13,18;CL:0002420,1.41e-13,18;CL:0002419,1.41e-13,18;CL:0000790,1.41e-13,18;CL:0000037,1.22e-12,168;CL:0000988,8.35e-12,177;CL:0002031,1.28e-11,120;CL:0000624,4.14e-11,6;CL:0000775,9.18e-11,3;CL:0000623,1.55e-10,3;CL:0000825,1.55e-10,3;CL:0002032,1.72e-10,161;CL:0000837,1.72e-10,161;CL:0000226,7.46e-10,3;CL:0000842,7.46e-10,3;CL:0000084,1.25e-09,25;CL:0000827,1.25e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.45e-13;18!CL:0000051;6.87e-10;53 | |||
|ontology_enrichment_disease=DOID:0050687!8.13e-11!143;DOID:162!3.64e-09!235;DOID:14566!1.33e-08!239;DOID:305!3.68e-08!106 | |ontology_enrichment_disease=DOID:0050687!8.13e-11!143;DOID:162!3.64e-09!235;DOID:14566!1.33e-08!239;DOID:305!3.68e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:630;3.82e-08;1!DOID:0050177;3.82e-08;1!DOID:1799;3.82e-08;1!DOID:10165;3.82e-08;1!DOID:0050427;3.82e-08;1!DOID:1798;3.82e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.57e-08,1;DOID:0050177,3.57e-08,1;DOID:0050427,3.57e-08,1;DOID:1799,6.68e-08,1;DOID:10165,6.68e-08,1;DOID:1798,6.68e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:92521923..92521946,- | |short_description=p@chr12:92521923..92521946,- | ||
}} | }} |
Latest revision as of 13:32, 24 July 2015
Short description: | p@chr12:92521923..92521946, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92521923..92521946, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.94e-17 | 52 |
lymphocyte | 6.86e-17 | 53 |
common lymphoid progenitor | 6.86e-17 | 53 |
leukocyte | 1.67e-16 | 136 |
nongranular leukocyte | 7.43e-16 | 115 |
mature alpha-beta T cell | 1.41e-13 | 18 |
alpha-beta T cell | 1.41e-13 | 18 |
immature T cell | 1.41e-13 | 18 |
mature T cell | 1.41e-13 | 18 |
immature alpha-beta T cell | 1.41e-13 | 18 |
hematopoietic stem cell | 1.22e-12 | 168 |
hematopoietic cell | 8.35e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.28e-11 | 120 |
CD4-positive, alpha-beta T cell | 4.14e-11 | 6 |
neutrophil | 9.18e-11 | 3 |
natural killer cell | 1.55e-10 | 3 |
pro-NK cell | 1.55e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.72e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-10 | 161 |
single nucleate cell | 7.46e-10 | 3 |
mononuclear cell | 7.46e-10 | 3 |
T cell | 1.25e-09 | 25 |
pro-T cell | 1.25e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.57e-08 | 1 |
monogenic disease | 3.57e-08 | 1 |
xeroderma pigmentosum | 3.57e-08 | 1 |
islet cell tumor | 6.68e-08 | 1 |
endocrine pancreas cancer | 6.68e-08 | 1 |
pancreatic endocrine carcinoma | 6.68e-08 | 1 |