FFCP PHASE1:Hg19::chr14:22918581..22918592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-488bp_to_uc001wdx.3_5end | |association_with_transcript=-488bp_to_uc001wdx.3_5end | ||
|cluster_id=chr14:22918581..22918592,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_uc001wdx.3_5end | |description=CAGE_peak_3_at_uc001wdx.3_5end | ||
|id=chr14:22918581..22918592,+ | |id=chr14:22918581..22918592,+ | ||
|ontology_enrichment_celltype=CL:0000625!1.38e-10!11;CL:0000136!2.24e-08!15;CL:0000791!3.01e-07!18;CL:0000789!3.01e-07!18;CL:0002420!3.01e-07!18;CL:0002419!3.01e-07!18;CL:0000790!3.01e-07!18 | |ontology_enrichment_celltype=CL:0000625!1.38e-10!11;CL:0000136!2.24e-08!15;CL:0000791!3.01e-07!18;CL:0000789!3.01e-07!18;CL:0002420!3.01e-07!18;CL:0002419!3.01e-07!18;CL:0000790!3.01e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.20e-22;13!CL:0000623;2.63e-15;3!CL:0000767;3.48e-14;3!CL:0000625;1.19e-09;11!CL:0000791;2.84e-08;18!CL:0000789;2.84e-08;18!CL:0002419;2.84e-08;18!CL:0002521;3.81e-07;3!CL:0002393;3.93e-07;6!CL:0002397;3.93e-07;6!CL:0000226;5.08e-07;3!CL:0000842;5.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.75e-19,15;CL:0000623,2.57e-15,3;CL:0000825,2.57e-15,3;CL:0000767,2.37e-14,3;CL:0000625,1.10e-09,11;CL:0000791,2.69e-08,18;CL:0000789,2.69e-08,18;CL:0002420,2.69e-08,18;CL:0002419,2.69e-08,18;CL:0000790,2.69e-08,18;CL:0002521,3.48e-07,3;CL:0000226,5.00e-07,3;CL:0000842,5.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.84e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.40e-21!115;UBERON:0000178!3.16e-15!15;UBERON:0000179!3.16e-15!15;UBERON:0000463!3.16e-15!15 | |ontology_enrichment_uberon=UBERON:0007023!7.40e-21!115;UBERON:0000178!3.16e-15!15;UBERON:0000179!3.16e-15!15;UBERON:0000463!3.16e-15!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.87e-35;15!UBERON:0000179;6.87e-35;15!UBERON:0000463;6.87e-35;15!UBERON:0002390;2.67e-14;32!UBERON:0002193;4.09e-08;42!UBERON:0002190;3.81e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.87e-35,15;UBERON:0000179,7.87e-35,15;UBERON:0000463,7.87e-35,15;UBERON:0002190,3.48e-07,3;UBERON:0002390,4.80e-07,98;UBERON:0003061,4.80e-07,98 | |||
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| ||
|short_description=p3@uc001wdx.3 | |short_description=p3@uc001wdx.3 | ||
}} | }} |
Latest revision as of 19:11, 24 July 2015
Short description: | p3@uc001wdx.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001wdx.3_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -488bp_to_uc001wdx.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.75e-19 | 15 |
natural killer cell | 2.57e-15 | 3 |
pro-NK cell | 2.57e-15 | 3 |
basophil | 2.37e-14 | 3 |
CD8-positive, alpha-beta T cell | 1.10e-09 | 11 |
mature alpha-beta T cell | 2.69e-08 | 18 |
alpha-beta T cell | 2.69e-08 | 18 |
immature T cell | 2.69e-08 | 18 |
mature T cell | 2.69e-08 | 18 |
immature alpha-beta T cell | 2.69e-08 | 18 |
subcutaneous fat cell | 3.48e-07 | 3 |
single nucleate cell | 5.00e-07 | 3 |
mononuclear cell | 5.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.87e-35 | 15 |
haemolymphatic fluid | 7.87e-35 | 15 |
organism substance | 7.87e-35 | 15 |
subcutaneous adipose tissue | 3.48e-07 | 3 |
hematopoietic system | 4.80e-07 | 98 |
blood island | 4.80e-07 | 98 |