FFCP PHASE1:Hg19::chr14:75744006..75744015,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75744006..75744015,+ | |||
|coexpression_cluster_id=C692 | |coexpression_cluster_id=C692 | ||
|description=CAGE_peak_at_chr14:75744006..75744015,+ | |description=CAGE_peak_at_chr14:75744006..75744015,+ | ||
|id=chr14:75744006..75744015,+ | |id=chr14:75744006..75744015,+ | ||
|ontology_enrichment_celltype=CL:0000094;1.72e-36;8!CL:0000081;1.43e-26;11!CL:0000771;1.96e-24;2!CL:0000097;2.32e-22;5!CL:0002393;4.07e-18;6!CL:0002397;4.07e-18;6!CL:0000775;1.49e-16;3!CL:0002032;6.82e-13;1!CL:0000557;6.82e-13;1!CL:0000163;1.06e-12;9!CL:0000766;5.96e-09;69 | |ontology_enrichment_celltype=CL:0002057!7.63e-27!42;CL:0000860!2.10e-24!45;CL:0000766!6.39e-24!76;CL:0000839!1.38e-18!70;CL:0000557!2.39e-18!71;CL:0000738!2.70e-17!140;CL:0002194!1.13e-15!63;CL:0000576!1.13e-15!63;CL:0000040!1.13e-15!63;CL:0000559!1.13e-15!63;CL:0000763!2.80e-15!112;CL:0000049!2.80e-15!112;CL:0002393!3.34e-15!9;CL:0002397!3.34e-15!9;CL:0002009!6.41e-15!65;CL:0000037!1.13e-13!172;CL:0000566!1.13e-13!172;CL:0000988!4.20e-12!182;CL:0002031!5.94e-12!124;CL:0002087!6.78e-12!119;CL:0002032!1.07e-11!165;CL:0000837!1.07e-11!165;CL:0000094!2.07e-08!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000094;1.72e-36;8!CL:0000081;1.43e-26;11!CL:0000771;1.96e-24;2!CL:0000097;2.32e-22;5!CL:0002393;4.07e-18;6!CL:0002397;4.07e-18;6!CL:0000775;1.49e-16;3!CL:0002032;6.82e-13;1!CL:0000557;6.82e-13;1!CL:0000163;1.06e-12;9!CL:0000766;5.96e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.43e-36,8;CL:0000081,1.25e-26,11;CL:0000771,1.45e-24,2;CL:0000097,2.32e-22,5;CL:0002028,2.32e-22,5;CL:0000766,4.48e-18,72;CL:0000775,1.49e-16,3;CL:0000763,6.09e-14,108;CL:0000049,6.09e-14,108;CL:0000163,1.06e-12,9;CL:0002393,3.69e-12,9;CL:0002397,3.69e-12,9;CL:0000738,9.01e-11,136;CL:0002032,1.57e-10,161;CL:0000837,1.57e-10,161;CL:0000037,5.11e-10,168;CL:0000988,2.03e-09,177;CL:0000557,7.13e-08,67 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.33e-13;1!UBERON:0008425;6.82e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.15e-17!80;UBERON:0001474!2.19e-16!86;UBERON:0002390!2.46e-16!102;UBERON:0003061!2.46e-16!102;UBERON:0002193!8.28e-14!112;UBERON:0004765!2.33e-12!101;UBERON:0001434!2.33e-12!101;UBERON:0002405!2.20e-10!115;UBERON:0003081!5.23e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.09e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,2.94150634300544,0,0,0,0,0,0.293600439334847,0.553995408531877,1.00272223735071,3.25516306073778,0,0,0,0.290796477559129,0,0,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,0,0,0.659702600373432,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.212604299965044,1.04829322754188,0.336985893439485,0.600707571366025,0.964353520182481,0.855038231223746,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,1.70763890732835,0,0.764546456250458,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,6.48539790376326,5.0496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0.167516265334349,0,2.99602809578873,0,1.24324654030811,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,1.04951999995435,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,2.94150634300544,0,0,0,0,0,0.293600439334847,0.553995408531877,1.00272223735071,3.25516306073778,0,0,0,0.290796477559129,0,0,0.697287110717054,0.822335776043652,0,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0,0,0.564727018627814,0.272906150057846,0,0.918251677112708,0,0,0.659702600373432,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.212604299965044,1.04829322754188,0.336985893439485,0.600707571366025,0.964353520182481,0.855038231223746,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,1.70763890732835,0,0.764546456250458,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35389042635621,6.48539790376326,5.0496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0.167516265334349,0,2.99602809578873,0,1.24324654030811,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,1.04951999995435,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr14:75744006..75744015,+ | |short_description=p@chr14:75744006..75744015,+ | ||
}} | }} |
Latest revision as of 22:49, 24 July 2015
Short description: | p@chr14:75744006..75744015, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75744006..75744015, + |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.43e-36 | 8 |
blood cell | 1.25e-26 | 11 |
eosinophil | 1.45e-24 | 2 |
mast cell | 2.32e-22 | 5 |
basophil mast progenitor cell | 2.32e-22 | 5 |
myeloid leukocyte | 4.48e-18 | 72 |
neutrophil | 1.49e-16 | 3 |
myeloid cell | 6.09e-14 | 108 |
common myeloid progenitor | 6.09e-14 | 108 |
endocrine cell | 1.06e-12 | 9 |
intermediate monocyte | 3.69e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.69e-12 | 9 |
leukocyte | 9.01e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-10 | 161 |
hematopoietic stem cell | 5.11e-10 | 168 |
hematopoietic cell | 2.03e-09 | 177 |
granulocyte monocyte progenitor cell | 7.13e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.09e-07 | 76 |