FFCP PHASE1:Hg19::chr15:33406335..33406350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33406335..33406350,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr15:33406335..33406350,- | |description=CAGE_peak_at_chr15:33406335..33406350,- | ||
|id=chr15:33406335..33406350,- | |id=chr15:33406335..33406350,- | ||
|ontology_enrichment_celltype=CL:0002556!1.39e-13!6;CL:0002541!3.57e-08!3 | |ontology_enrichment_celltype=CL:0002556!1.39e-13!6;CL:0002541!3.57e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.95e-19;3!CL:0002556;2.92e-16;6!CL:1001319;9.10e-08;1!CL:1000600;9.10e-08;1!CL:0000083;7.38e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.90e-19,3;CL:0002556,2.59e-16,6;CL:1001319,9.10e-08,1;CL:1000600,9.10e-08,1;CL:0000083,6.85e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.53e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.07e-07;1!DOID:3165;2.07e-07;1!DOID:0060121;2.07e-07;1!DOID:2438;2.07e-07;1!DOID:4418;2.07e-07;1!DOID:1799;3.96e-07;1!DOID:10165;3.96e-07;1!DOID:1798;3.96e-07;1!DOID:1793;7.38e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.50e-07,1;DOID:3165,2.50e-07,1;DOID:0060121,2.50e-07,1;DOID:2438,2.50e-07,1;DOID:4418,2.50e-07,1;DOID:1799,3.40e-07,1;DOID:10165,3.40e-07,1;DOID:1798,3.40e-07,1;DOID:1793,6.85e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001758!1.39e-13!6;UBERON:0003672!1.39e-13!6;UBERON:0000165!6.46e-09!28;UBERON:0000930!6.46e-09!28;UBERON:0000476!3.57e-08!3;UBERON:0000920!3.57e-08!3;UBERON:0003102!1.23e-07!95;UBERON:0003129!5.36e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.95e-19;3!UBERON:0000920;1.95e-19;3!UBERON:0001758;2.92e-16;6!UBERON:0003672;2.92e-16;6!UBERON:0003129;5.76e-14;7!UBERON:0005631;3.12e-10;10!UBERON:0000158;3.12e-10;10!UBERON:0011137;6.13e-09;11!UBERON:0010323;6.13e-09;11!UBERON:0004645;9.10e-08;1!UBERON:0001256;9.10e-08;1!UBERON:0001259;9.10e-08;1!UBERON:0000165;3.49e-07;28!UBERON:0007195;3.96e-07;1!UBERON:0001434;9.02e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.90e-19,3;UBERON:0001758,2.59e-16,6;UBERON:0003672,2.59e-16,6;UBERON:0003124,1.18e-14,7;UBERON:0003129,5.21e-14,7;UBERON:0005631,4.22e-11,14;UBERON:0000158,4.22e-11,14;UBERON:0010323,5.75e-09,11;UBERON:0004645,9.10e-08,1;UBERON:0001256,9.10e-08,1;UBERON:0001259,9.10e-08,1;UBERON:0007195,4.34e-07,1;UBERON:0011137,4.58e-07,14;UBERON:0000165,6.14e-07,29;UBERON:0000930,6.14e-07,29 | |||
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| ||
|short_description=p@chr15:33406335..33406350,- | |short_description=p@chr15:33406335..33406350,- | ||
}} | }} |
Latest revision as of 00:51, 25 July 2015
Short description: | p@chr15:33406335..33406350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33406335..33406350, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.90e-19 | 3 |
fibroblast of periodontium | 2.59e-16 | 6 |
bladder cell | 9.10e-08 | 1 |
lower urinary tract cell | 9.10e-08 | 1 |
epithelial cell of pancreas | 6.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.90e-19 | 3 |
periodontium | 2.59e-16 | 6 |
dentition | 2.59e-16 | 6 |
chorion | 1.18e-14 | 7 |
skull | 5.21e-14 | 7 |
extraembryonic membrane | 4.22e-11 | 14 |
membranous layer | 4.22e-11 | 14 |
cranial skeletal system | 5.75e-09 | 11 |
urinary bladder urothelium | 9.10e-08 | 1 |
wall of urinary bladder | 9.10e-08 | 1 |
mucosa of urinary bladder | 9.10e-08 | 1 |
stroma of bone marrow | 4.34e-07 | 1 |
axial skeletal system | 4.58e-07 | 14 |
mouth | 6.14e-07 | 29 |
stomodeum | 6.14e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.50e-07 | 1 |
skin benign neoplasm | 2.50e-07 | 1 |
integumentary system benign neoplasm | 2.50e-07 | 1 |
dermis tumor | 2.50e-07 | 1 |
cutaneous fibrous histiocytoma | 2.50e-07 | 1 |
islet cell tumor | 3.40e-07 | 1 |
endocrine pancreas cancer | 3.40e-07 | 1 |
pancreatic endocrine carcinoma | 3.40e-07 | 1 |
pancreatic cancer | 6.85e-07 | 4 |