FFCP PHASE1:Hg19::chr15:39882147..39882159,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39882147..39882159,+ to FFCP PHASE1:Hg19::chr15:39882147..39882159,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39882147..39882159,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39882147..39882159,+ | |||
|id=chr15:39882147..39882159,+ | |||
|ontology_enrichment_celltype=CL:0002371!4.63e-16!591;CL:0000057!3.70e-15!75;CL:0000055!5.58e-15!180;CL:0000144!3.85e-13!625;CL:0002139!1.19e-11!24;CL:0000548!9.76e-11!679;CL:0000004!9.76e-11!679;CL:0000255!9.76e-11!679;CL:0000222!1.56e-10!119;CL:0000012!2.59e-10!682;CL:0000220!1.28e-09!246;CL:0000115!1.42e-09!35;CL:0002321!2.81e-09!248;CL:0000071!1.00e-08!18;CL:0002546!1.00e-08!18;CL:0002334!2.81e-08!12;CL:0002078!3.76e-08!44;CL:0002620!2.35e-07!23;CL:1000413!6.32e-07!9;CL:0000359!9.58e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.18e-11;12!CL:0002139;7.89e-11;24!CL:0000071;2.18e-09;18!CL:0000115;7.37e-09;36!CL:1000413;1.49e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.94e-14,76;CL:0002334,3.71e-11,12;CL:0002139,8.20e-11,24;CL:0000115,8.07e-10,36;CL:0000071,2.14e-09,18;CL:0002546,2.14e-09,18;CL:0002078,1.14e-07,45;CL:1000413,1.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.18e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.31e-08;5!DOID:450;6.31e-08;5!DOID:66;6.31e-08;5!DOID:423;6.31e-08;5!DOID:0080000;6.31e-08;5!DOID:11722;6.31e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.14e-08,5;DOID:450,9.14e-08,5;DOID:66,9.14e-08,5;DOID:423,9.14e-08,5;DOID:0080000,9.14e-08,5;DOID:11722,9.14e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.80e-18!69;UBERON:0002049!6.47e-18!79;UBERON:0007798!6.47e-18!79;UBERON:0004872!1.10e-17!84;UBERON:0001981!4.34e-17!60;UBERON:0007500!4.34e-17!60;UBERON:0004537!4.34e-17!60;UBERON:0006965!4.34e-17!60;UBERON:0001009!1.55e-15!113;UBERON:0004535!2.60e-15!110;UBERON:0001637!8.82e-15!42;UBERON:0003509!8.82e-15!42;UBERON:0004572!8.82e-15!42;UBERON:0003914!8.41e-13!118;UBERON:0004573!2.81e-10!33;UBERON:0004571!2.81e-10!33;UBERON:0000467!2.39e-09!625;UBERON:0000480!3.23e-09!626;UBERON:0000490!3.25e-09!138;UBERON:0000468!4.44e-09!659;UBERON:0001986!1.00e-08!18;UBERON:0004638!1.00e-08!18;UBERON:0004852!1.00e-08!18;UBERON:0000487!2.42e-08!22;UBERON:0000947!2.64e-08!21;UBERON:0010191!2.64e-08!21;UBERON:0006914!3.50e-08!25;UBERON:0002199!6.18e-08!45;UBERON:0002416!6.18e-08!45;UBERON:0003102!1.88e-07!95;UBERON:0002097!2.31e-07!40;UBERON:0003915!6.32e-07!9;UBERON:0004700!6.32e-07!9;UBERON:0001917!6.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.27e-11;42!UBERON:0003509;6.27e-11;42!UBERON:0004572;6.27e-11;42!UBERON:0004638;2.18e-09;18!UBERON:0001986;2.18e-09;18!UBERON:0004852;2.18e-09;18!UBERON:0003688;7.60e-09;6!UBERON:0002358;7.60e-09;6!UBERON:0003684;7.60e-09;6!UBERON:0001178;7.60e-09;6!UBERON:0004573;7.74e-09;33!UBERON:0004571;7.74e-09;33!UBERON:0007500;8.11e-09;56!UBERON:0001981;8.11e-09;56!UBERON:0004537;8.11e-09;56!UBERON:0000055;1.42e-07;65!UBERON:0003915;1.49e-07;9!UBERON:0004700;1.49e-07;9!UBERON:0001917;1.49e-07;9!UBERON:0000487;3.95e-07;22!UBERON:0002199;4.23e-07;46!UBERON:0002416;4.23e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.60e-14,68;UBERON:0001637,8.01e-14,42;UBERON:0003509,8.01e-14,42;UBERON:0004572,8.01e-14,42;UBERON:0007500,8.07e-14,59;UBERON:0001981,8.07e-14,59;UBERON:0004537,8.07e-14,59;UBERON:0006965,8.07e-14,59;UBERON:0004872,2.41e-12,83;UBERON:0002049,4.63e-12,78;UBERON:0007798,4.63e-12,78;UBERON:0002199,5.07e-10,46;UBERON:0002416,5.07e-10,46;UBERON:0004638,2.14e-09,18;UBERON:0001986,2.14e-09,18;UBERON:0004852,2.14e-09,18;UBERON:0004573,4.38e-09,33;UBERON:0004571,4.38e-09,33;UBERON:0003914,7.40e-09,117;UBERON:0003688,8.40e-09,6;UBERON:0002358,8.40e-09,6;UBERON:0003684,8.40e-09,6;UBERON:0001178,8.40e-09,6;UBERON:0004535,1.36e-08,109;UBERON:0002097,1.71e-08,41;UBERON:0001009,4.17e-08,112;UBERON:0003915,1.16e-07,9;UBERON:0004700,1.16e-07,9;UBERON:0001917,1.16e-07,9;UBERON:0000487,3.89e-07,22 | |||
|phase1_expression=2.36181893051724,11.1332272423311,1.26858963686374,13.009528785907,2.68176656656373,9.59572376510406,2.53299878168311,0,0,0.491467873003018,0.697801167972428,1.74753097704138,1.84636884759917,0.123766352960047,0.662794751455832,5.3786011716142,1.80808358407193,5.11217063271161,3.41552959153355,0,0.204000691244253,0.626909442956176,0.286235987131057,0.821246550437305,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,2.4065333696417,0.651032612147555,0,0,0,0.145398238779565,0,0,0.697287110717054,0,0,2.01384674625505,0.768482119587302,0.236482229888585,2.75796544589295,0,0,1.69418105588344,0,0,1.22433556948361,0,0,0.659702600373432,0,0,3.77272010217159,0,0,0.502497330513487,0,0,3.02699751316684,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.02290049474824,1.0843174571537,1.50401373190767,1.73815822752988,0,0.973269740605272,0.189069634328136,0.665188192387692,0.087834785693126,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.993812036833525,2.58070378531837,0.694281003215189,1.69592382577203,3.77549492588915,4.40188867104108,2.50793959844173,0.775250277507987,0.35576626268671,0.66944122552934,2.41697590265488,0,4.39311703586705,4.77962004449629,4.0507097394088,0.892997282840798,2.02076435363553,0.900891843866578,1.53316637465883,0,2.19842092716489,0,0,0.436094052142534,6.46063537203914,2.91250176828533,0.926864265692532,3.15520282823695,0.709336764396714,0.560677600142307,0,8.14002909776628,0.311211035399766,0.269421344139376,0.817309515567294,0,1.15235184896,0,0.312160076830321,0,0.896692083310806,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,1.18800285728205,5.43987244412825,0,0,0,0,0.554128230968366,0,5.21029252858333,1.95309476578576,1.70148274740032,14.1717812194201,4.05759038755278,2.33125091275518,4.80145753735044,1.13357782162283,10.8209026819164,1.30281799432113,0.843881661206331,1.55899208257918,3.02920529092937,1.74894807420369,1.2931684545505,9.9402685904652,0.906768884048762,0.67824236924195,0,0,0,0,0,0,0,0,0,4.69348596989448,9.64861407289328,0,6.96551892047969,5.77503585335668,0.354920400119532,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.658501712451753,0,1.60846355858609,0.833296006426766,0,1.03993478527958,0,0.115930404975077,0,3.03169540298255,11.1116523018387,8.18092854608773,0,0,0,0,0,0,1.51183915378974,1.13420077793909,1.52249488594842,0.871901815541886,1.53353071666084,0.492663237895943,0,0,0,0,0,0,0,1.71072446022705,0.514137463516618,0,0,0,0,0,0.258543431515556,0,1.690605505112,0,1.04007436911366,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0.718874566474748,0,0,0.723906533337896,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,10.814484799602,26.5859193307771,9.30444248700215,4.4513737697231,0,0,1.03473071292505,0.664225598535437,0.737476674166813,3.12781012085098,0,0,0,0,0.320182673410333,0.303127571446259,1.66435439510497,2.72151263996712,1.98486246255021,5.06424511850606,11.507063871756,1.28139149255701,5.11707249066703,4.66476371316462,7.42090332224955,2.62156479464514,2.30830242907065,0.0821271560138091,1.55776328755086,0.581051892299796,0,3.20810352485256,0.0920809889358963,0.803701137152247,0.546273504020151,1.04899531967539,0,0,0,0,0,2.27466768141793,1.53084334748864,1.51141141271498,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0,0.27470839445503,0,0.574265537996172,4.55042172225565,0,0,0,0,0.551346289938122,0.214840489736547,0.725083469571143,0.0852266274161009,0.0890320356467374,0.991709492165869,0.960950336825531,2.04180339991335,0.2023155617111,0.464845549297286,2.83331112147576,0,0,0,0.869932992075073,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0.706874414074119,0.404364963146632,3.17020642346017,2.10629228119491,0,3.41198885483798,4.22600587027022,0.409499734223957,0.565621727814851,1.13008116620243,0,4.64407282668854,1.31535265576129,0.578775534266688,0,1.01455188481352,3.0982349809975,0.845086807596724,0.143411352204052,0.392996164052485,0.7133421029625,0,0.844430541190656,0.329294892959902,0,0.699869440489966,0.192444225451024,0.670302275535787,1.08890984861323,0,0.86101074534246,5.05414427002877,2.66058092122005,1.60806380144872,0.507447609232169,0,0.569647187174163,0,0,0,0,0.79312517629427,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,0.296964680832639,4.60741053148848,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,3.11039587661807,1.16828856491525,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159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| ||
|short_description=p@chr15:39882147..39882159,+ | |||
}} | }} |
Latest revision as of 01:17, 25 July 2015
Short description: | p@chr15:39882147..39882159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39882147..39882159, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.94e-14 | 76 |
preadipocyte | 3.71e-11 | 12 |
endothelial cell of vascular tree | 8.20e-11 | 24 |
endothelial cell | 8.07e-10 | 36 |
blood vessel endothelial cell | 2.14e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-09 | 18 |
meso-epithelial cell | 1.14e-07 | 45 |
endothelial cell of artery | 1.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.60e-14 | 68 |
artery | 8.01e-14 | 42 |
arterial blood vessel | 8.01e-14 | 42 |
arterial system | 8.01e-14 | 42 |
epithelial tube open at both ends | 8.07e-14 | 59 |
blood vessel | 8.07e-14 | 59 |
blood vasculature | 8.07e-14 | 59 |
vascular cord | 8.07e-14 | 59 |
splanchnic layer of lateral plate mesoderm | 2.41e-12 | 83 |
vasculature | 4.63e-12 | 78 |
vascular system | 4.63e-12 | 78 |
integument | 5.07e-10 | 46 |
integumental system | 5.07e-10 | 46 |
blood vessel endothelium | 2.14e-09 | 18 |
endothelium | 2.14e-09 | 18 |
cardiovascular system endothelium | 2.14e-09 | 18 |
systemic artery | 4.38e-09 | 33 |
systemic arterial system | 4.38e-09 | 33 |
epithelial tube | 7.40e-09 | 117 |
omentum | 8.40e-09 | 6 |
peritoneum | 8.40e-09 | 6 |
abdominal cavity | 8.40e-09 | 6 |
visceral peritoneum | 8.40e-09 | 6 |
cardiovascular system | 1.36e-08 | 109 |
skin of body | 1.71e-08 | 41 |
circulatory system | 4.17e-08 | 112 |
endothelial tube | 1.16e-07 | 9 |
arterial system endothelium | 1.16e-07 | 9 |
endothelium of artery | 1.16e-07 | 9 |
simple squamous epithelium | 3.89e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.14e-08 | 5 |
myotonic disease | 9.14e-08 | 5 |
muscle tissue disease | 9.14e-08 | 5 |
myopathy | 9.14e-08 | 5 |
muscular disease | 9.14e-08 | 5 |
myotonic dystrophy | 9.14e-08 | 5 |