FFCP PHASE1:Hg19::chr15:39888341..39888350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888341..39888350,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_at_chr15:39888341..39888350,+ | |description=CAGE_peak_at_chr15:39888341..39888350,+ | ||
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|ontology_enrichment_celltype=CL:0000057!3.34e-16!75;CL:0002371!2.25e-13!591;CL:0000055!1.31e-12!180;CL:0000144!4.51e-12!625;CL:0000548!1.13e-11!679;CL:0000004!1.13e-11!679;CL:0000255!1.13e-11!679;CL:0000012!2.68e-11!682;CL:0000115!4.70e-10!35;CL:0000222!4.72e-10!119;CL:0002139!7.02e-10!24;CL:0000220!1.99e-09!246;CL:0002321!3.97e-09!248;CL:0002620!5.38e-09!23;CL:0002078!1.96e-07!44;CL:0000063!2.62e-07!578;CL:0002334!5.90e-07!12;CL:0000213!7.45e-07!57;CL:0000215!7.45e-07!57;CL:0000003!9.30e-07!722 | |ontology_enrichment_celltype=CL:0000057!3.34e-16!75;CL:0002371!2.25e-13!591;CL:0000055!1.31e-12!180;CL:0000144!4.51e-12!625;CL:0000548!1.13e-11!679;CL:0000004!1.13e-11!679;CL:0000255!1.13e-11!679;CL:0000012!2.68e-11!682;CL:0000115!4.70e-10!35;CL:0000222!4.72e-10!119;CL:0002139!7.02e-10!24;CL:0000220!1.99e-09!246;CL:0002321!3.97e-09!248;CL:0002620!5.38e-09!23;CL:0002078!1.96e-07!44;CL:0000063!2.62e-07!578;CL:0002334!5.90e-07!12;CL:0000213!7.45e-07!57;CL:0000215!7.45e-07!57;CL:0000003!9.30e-07!722 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000057,2.05e-17,76;CL:0002334,3.33e-10,12;CL:0005020,5.26e-10,6;CL:0002138,5.26e-10,6;CL:0005022,5.26e-10,6;CL:0002580,3.43e-09,3;CL:0002579,1.63e-08,3;CL:0000346,4.71e-08,3;CL:1000428,4.71e-08,3;CL:0000048,4.26e-07,427;CL:0000197,6.65e-07,6;CL:0000098,6.65e-07,6;CL:0002167,6.65e-07,6;CL:0002620,7.30e-07,23;CL:0000723,8.36e-07,433 | |||
|ontology_enrichment_development_v019=CL:0005022;6.71e-10;6 | |ontology_enrichment_development_v019=CL:0005022;6.71e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.01e-08;5!DOID:450;8.01e-08;5!DOID:66;8.01e-08;5!DOID:423;8.01e-08;5!DOID:0080000;8.01e-08;5!DOID:11722;8.01e-08;5 | |ontology_enrichment_disease_v019=DOID:17;8.01e-08;5!DOID:450;8.01e-08;5!DOID:66;8.01e-08;5!DOID:423;8.01e-08;5!DOID:0080000;8.01e-08;5!DOID:11722;8.01e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,9.17e-08,5;DOID:450,9.17e-08,5;DOID:66,9.17e-08,5;DOID:423,9.17e-08,5;DOID:0080000,9.17e-08,5;DOID:11722,9.17e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.91e-15!69;UBERON:0002049!1.44e-13!79;UBERON:0007798!1.44e-13!79;UBERON:0001981!2.98e-13!60;UBERON:0007500!2.98e-13!60;UBERON:0004537!2.98e-13!60;UBERON:0006965!2.98e-13!60;UBERON:0004872!3.71e-12!84;UBERON:0003914!5.66e-12!118;UBERON:0003102!2.52e-11!95;UBERON:0002199!4.66e-11!45;UBERON:0002416!4.66e-11!45;UBERON:0001637!4.69e-11!42;UBERON:0003509!4.69e-11!42;UBERON:0004572!4.69e-11!42;UBERON:0004535!3.27e-10!110;UBERON:0001009!5.15e-10!113;UBERON:0002100!1.02e-09!216;UBERON:0002097!1.31e-09!40;UBERON:0000468!4.61e-09!659;UBERON:0000467!1.25e-08!625;UBERON:0000480!1.61e-08!626;UBERON:0000486!7.77e-08!82;UBERON:0000490!1.44e-07!138;UBERON:0005256!2.60e-07!143;UBERON:0000914!2.96e-07!83;UBERON:0002329!2.96e-07!83;UBERON:0003077!2.96e-07!83;UBERON:0003059!2.96e-07!83;UBERON:0007282!2.96e-07!83;UBERON:0009618!2.96e-07!83;UBERON:0007285!2.96e-07!83;UBERON:0000475!3.91e-07!365;UBERON:0000487!5.50e-07!22;UBERON:0004573!6.02e-07!33;UBERON:0004571!6.02e-07!33;UBERON:0000947!7.90e-07!21;UBERON:0010191!7.90e-07!21 | |ontology_enrichment_uberon=UBERON:0000055!2.91e-15!69;UBERON:0002049!1.44e-13!79;UBERON:0007798!1.44e-13!79;UBERON:0001981!2.98e-13!60;UBERON:0007500!2.98e-13!60;UBERON:0004537!2.98e-13!60;UBERON:0006965!2.98e-13!60;UBERON:0004872!3.71e-12!84;UBERON:0003914!5.66e-12!118;UBERON:0003102!2.52e-11!95;UBERON:0002199!4.66e-11!45;UBERON:0002416!4.66e-11!45;UBERON:0001637!4.69e-11!42;UBERON:0003509!4.69e-11!42;UBERON:0004572!4.69e-11!42;UBERON:0004535!3.27e-10!110;UBERON:0001009!5.15e-10!113;UBERON:0002100!1.02e-09!216;UBERON:0002097!1.31e-09!40;UBERON:0000468!4.61e-09!659;UBERON:0000467!1.25e-08!625;UBERON:0000480!1.61e-08!626;UBERON:0000486!7.77e-08!82;UBERON:0000490!1.44e-07!138;UBERON:0005256!2.60e-07!143;UBERON:0000914!2.96e-07!83;UBERON:0002329!2.96e-07!83;UBERON:0003077!2.96e-07!83;UBERON:0003059!2.96e-07!83;UBERON:0007282!2.96e-07!83;UBERON:0009618!2.96e-07!83;UBERON:0007285!2.96e-07!83;UBERON:0000475!3.91e-07!365;UBERON:0000487!5.50e-07!22;UBERON:0004573!6.02e-07!33;UBERON:0004571!6.02e-07!33;UBERON:0000947!7.90e-07!21;UBERON:0010191!7.90e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.34e-11;6!UBERON:0002358;4.34e-11;6!UBERON:0003684;4.34e-11;6!UBERON:0001178;4.34e-11;6!UBERON:0004573;1.09e-08;33!UBERON:0004571;1.09e-08;33!UBERON:0001637;1.70e-08;42!UBERON:0003509;1.70e-08;42!UBERON:0004572;1.70e-08;42!UBERON:0000055;6.10e-08;65!UBERON:0000412;7.93e-08;3!UBERON:0001992;7.93e-08;3!UBERON:0000947;1.14e-07;21!UBERON:0010191;1.14e-07;21!UBERON:0001473;2.53e-07;8!UBERON:0004536;2.53e-07;8!UBERON:0006558;2.53e-07;8!UBERON:0004457;3.20e-07;9!UBERON:0000042;3.20e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.34e-11;6!UBERON:0002358;4.34e-11;6!UBERON:0003684;4.34e-11;6!UBERON:0001178;4.34e-11;6!UBERON:0004573;1.09e-08;33!UBERON:0004571;1.09e-08;33!UBERON:0001637;1.70e-08;42!UBERON:0003509;1.70e-08;42!UBERON:0004572;1.70e-08;42!UBERON:0000055;6.10e-08;65!UBERON:0000412;7.93e-08;3!UBERON:0001992;7.93e-08;3!UBERON:0000947;1.14e-07;21!UBERON:0010191;1.14e-07;21!UBERON:0001473;2.53e-07;8!UBERON:0004536;2.53e-07;8!UBERON:0006558;2.53e-07;8!UBERON:0004457;3.20e-07;9!UBERON:0000042;3.20e-07;9 | ||
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| ||
|short_description=p@chr15:39888341..39888350,+ | |short_description=p@chr15:39888341..39888350,+ | ||
}} | }} |
Latest revision as of 01:21, 25 July 2015
Short description: | p@chr15:39888341..39888350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888341..39888350, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.05e-17 | 76 |
preadipocyte | 3.33e-10 | 12 |
lymphangioblast | 5.26e-10 | 6 |
endothelial cell of lymphatic vessel | 5.26e-10 | 6 |
vascular lymphangioblast | 5.26e-10 | 6 |
preadipocyte of the breast | 3.43e-09 | 3 |
omentum preadipocyte | 1.63e-08 | 3 |
hair follicle dermal papilla cell | 4.71e-08 | 3 |
stem cell of epidermis | 4.71e-08 | 3 |
multi fate stem cell | 4.26e-07 | 427 |
receptor cell | 6.65e-07 | 6 |
sensory epithelial cell | 6.65e-07 | 6 |
olfactory epithelial cell | 6.65e-07 | 6 |
skin fibroblast | 7.30e-07 | 23 |
somatic stem cell | 8.36e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.96e-11 | 6 |
peritoneum | 4.96e-11 | 6 |
abdominal cavity | 4.96e-11 | 6 |
visceral peritoneum | 4.96e-11 | 6 |
vessel | 1.33e-10 | 68 |
artery | 6.36e-10 | 42 |
arterial blood vessel | 6.36e-10 | 42 |
arterial system | 6.36e-10 | 42 |
systemic artery | 7.82e-09 | 33 |
systemic arterial system | 7.82e-09 | 33 |
vasculature | 1.44e-08 | 78 |
vascular system | 1.44e-08 | 78 |
dermal papilla | 4.71e-08 | 3 |
papillary layer of dermis | 4.71e-08 | 3 |
aorta | 1.73e-07 | 21 |
aortic system | 1.73e-07 | 21 |
lymphatic vessel | 2.12e-07 | 8 |
lymph vasculature | 2.12e-07 | 8 |
lymphatic part of lymphoid system | 2.12e-07 | 8 |
somatic layer of lateral plate mesoderm | 4.26e-07 | 8 |
epithelial tube open at both ends | 5.57e-07 | 59 |
blood vessel | 5.57e-07 | 59 |
blood vasculature | 5.57e-07 | 59 |
vascular cord | 5.57e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.17e-08 | 5 |
myotonic disease | 9.17e-08 | 5 |
muscle tissue disease | 9.17e-08 | 5 |
myopathy | 9.17e-08 | 5 |
muscular disease | 9.17e-08 | 5 |
myotonic dystrophy | 9.17e-08 | 5 |