FFCP PHASE1:Hg19::chr15:39888616..39888632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888616..39888632,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888616..39888632,+ | |description=CAGE_peak_at_chr15:39888616..39888632,+ | ||
|id=chr15:39888616..39888632,+ | |id=chr15:39888616..39888632,+ | ||
|ontology_enrichment_celltype=CL:0002371!7.72e-16!591;CL:0000144!2.75e-14!625;CL:0000548!1.56e-13!679;CL:0000004!1.56e-13!679;CL:0000255!1.56e-13!679;CL:0000012!1.56e-13!682;CL:0000055!3.11e-13!180;CL:0000057!5.01e-13!75;CL:0000222!2.49e-11!119;CL:0002139!2.78e-09!24;CL:0000003!3.40e-08!722;CL:0000192!6.53e-08!42;CL:0000514!6.53e-08!42;CL:0000115!7.74e-08!35;CL:0000220!9.50e-08!246;CL:0002078!1.08e-07!44;CL:0000359!1.42e-07!32;CL:0000063!1.61e-07!578;CL:0002321!1.88e-07!248;CL:0000680!6.52e-07!57;CL:0000056!6.52e-07!57;CL:0000355!6.52e-07!57 | |ontology_enrichment_celltype=CL:0002371!7.72e-16!591;CL:0000144!2.75e-14!625;CL:0000548!1.56e-13!679;CL:0000004!1.56e-13!679;CL:0000255!1.56e-13!679;CL:0000012!1.56e-13!682;CL:0000055!3.11e-13!180;CL:0000057!5.01e-13!75;CL:0000222!2.49e-11!119;CL:0002139!2.78e-09!24;CL:0000003!3.40e-08!722;CL:0000192!6.53e-08!42;CL:0000514!6.53e-08!42;CL:0000115!7.74e-08!35;CL:0000220!9.50e-08!246;CL:0002078!1.08e-07!44;CL:0000359!1.42e-07!32;CL:0000063!1.61e-07!578;CL:0002321!1.88e-07!248;CL:0000680!6.52e-07!57;CL:0000056!6.52e-07!57;CL:0000355!6.52e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.90e-09;23!CL:0002334;1.08e-08;12!CL:0002139;5.82e-08;24!CL:0000115;6.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-15,76;CL:0002620,6.59e-09,23;CL:0002334,1.02e-08,12;CL:0002139,6.75e-08,24;CL:0000048,1.45e-07,427;CL:0000723,3.53e-07,433;CL:0000115,4.09e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.37e-08;5!DOID:450;3.37e-08;5!DOID:66;3.37e-08;5!DOID:423;3.37e-08;5!DOID:0080000;3.37e-08;5!DOID:11722;3.37e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.85e-08,5;DOID:450,2.85e-08,5;DOID:66,2.85e-08,5;DOID:423,2.85e-08,5;DOID:0080000,2.85e-08,5;DOID:11722,2.85e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.41e-16!79;UBERON:0007798!1.41e-16!79;UBERON:0000055!1.79e-15!69;UBERON:0004872!1.75e-14!84;UBERON:0001981!4.15e-13!60;UBERON:0007500!4.15e-13!60;UBERON:0004537!4.15e-13!60;UBERON:0006965!4.15e-13!60;UBERON:0004535!9.36e-13!110;UBERON:0001009!3.18e-12!113;UBERON:0001637!1.52e-10!42;UBERON:0003509!1.52e-10!42;UBERON:0004572!1.52e-10!42;UBERON:0000467!5.90e-10!625;UBERON:0000468!7.25e-10!659;UBERON:0000480!8.07e-10!626;UBERON:0003914!8.90e-10!118;UBERON:0003102!3.26e-08!95;UBERON:0000914!8.28e-08!83;UBERON:0002329!8.28e-08!83;UBERON:0003077!8.28e-08!83;UBERON:0003059!8.28e-08!83;UBERON:0007282!8.28e-08!83;UBERON:0009618!8.28e-08!83;UBERON:0007285!8.28e-08!83;UBERON:0004573!1.06e-07!33;UBERON:0004571!1.06e-07!33;UBERON:0000926!1.37e-07!448;UBERON:0004120!1.37e-07!448;UBERON:0006603!1.37e-07!448;UBERON:0000490!1.56e-07!138;UBERON:0004923!1.59e-07!57;UBERON:0000486!3.58e-07!82;UBERON:0005631!9.45e-07!14;UBERON:0000158!9.45e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.30e-11;6!UBERON:0002358;5.30e-11;6!UBERON:0003684;5.30e-11;6!UBERON:0001178;5.30e-11;6!UBERON:0005631;3.11e-09;10!UBERON:0000158;3.11e-09;10!UBERON:0000305;3.86e-08;7!UBERON:0001637;3.99e-08;42!UBERON:0003509;3.99e-08;42!UBERON:0004572;3.99e-08;42!UBERON:0000055;3.80e-07;65!UBERON:0007500;4.66e-07;56!UBERON:0001981;4.66e-07;56!UBERON:0004537;4.66e-07;56!UBERON:0000947;4.94e-07;21!UBERON:0010191;4.94e-07;21!UBERON:0004457;5.80e-07;9!UBERON:0000042;5.80e-07;9!UBERON:0004573;9.34e-07;33!UBERON:0004571;9.34e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.93e-12,68;UBERON:0003688,4.66e-11,6;UBERON:0002358,4.66e-11,6;UBERON:0003684,4.66e-11,6;UBERON:0001178,4.66e-11,6;UBERON:0001637,1.74e-10,42;UBERON:0003509,1.74e-10,42;UBERON:0004572,1.74e-10,42;UBERON:0007500,2.34e-09,59;UBERON:0001981,2.34e-09,59;UBERON:0004537,2.34e-09,59;UBERON:0006965,2.34e-09,59;UBERON:0002049,2.38e-09,78;UBERON:0007798,2.38e-09,78;UBERON:0004871,3.27e-09,8;UBERON:0000305,4.03e-08,7;UBERON:0004872,4.10e-08,83;UBERON:0002199,9.61e-08,46;UBERON:0002416,9.61e-08,46;UBERON:0005631,1.80e-07,14;UBERON:0000158,1.80e-07,14;UBERON:0000947,3.21e-07,21;UBERON:0010191,3.21e-07,21;UBERON:0002097,3.38e-07,41;UBERON:0004573,3.53e-07,33;UBERON:0004571,3.53e-07,33;UBERON:0004923,5.47e-07,66 | |||
|phase1_expression=5.26867299884614,5.1384125733836,2.96004248601539,15.0109947529696,4.46961094427288,16.574431957907,2.53299878168311,0.631719873426831,0,0.491467873003018,0,2.18441372130172,1.05506791291381,0.123766352960047,0.331397375727916,2.6893005858071,4.82155622419182,1.46062018077475,4.87932798790507,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0.619264493264304,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.436194716338694,0,0,1.62700325833979,0,0,1.7261543539329,0.256160706529101,0.236482229888585,2.06847408441971,0,0,0.564727018627814,0,0.449446968890169,1.22433556948361,0.320929027076094,0.639337125799041,0.989553900560148,0,0.426224750532694,4.06292934080018,0.56738522469114,0,1.7587406567972,1.0429658368404,0.217188844705117,4.23779651843358,0,0.316462387440884,0,0,0,0,0.901061357049038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0.722878304769133,1.00267582127178,1.44846518960824,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,1.59009925893364,0,0.694281003215189,0,0.419499436209906,0.825354125820202,1.04497483268405,1.8089173141853,0.71153252537342,1.00416183829401,1.20848795132744,0.760272105718513,3.1728067481262,3.30896772311282,2.43042584364528,1.42879565254528,0.44905874525234,0.675668882899933,0,0.949265659568129,2.93122790288652,0,3.87780264148325,0.872188104285069,10.4364109856017,2.65924074495618,1.85372853138506,2.58152958673932,0.354668382198357,0.560677600142307,0,3.45334567784024,0.311211035399766,0.134710672069688,0.817309515567294,0.454072282934794,0,0,0,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0.368502951935304,0.309977343527296,1.18800285728205,5.19260551484969,0.910161361938026,0,0.168336113954066,0,0.277064115484183,1.31693286264251,3.37136575378922,3.60571341375832,1.70148274740032,5.74046834204358,3.63047560991565,3.39091041855299,1.80054657650641,1.13357782162283,3.34932702059318,2.41951913231067,2.70042131586026,1.75386609290158,2.01947019395292,2.57739716198438,0.80823028409406,2.84007674013291,0.906768884048762,1.3564847384839,0.57978255948989,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,4.5026865673502,1.38134921352481,3.25057549622385,0.721879481669586,0,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,0,0.402115889646523,0.833296006426766,0,0,0,0,0.117408694235822,1.29929802984966,6.01881166349594,5.89787871927255,0,0,0,0,0,0,2.51973192298289,1.55952606966625,1.16426079513703,0.871901815541886,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0,0,0,0,0,0.517086863031111,0,0,1.86156681609409,4.16029747645464,1.28603687131071,0,0,0.714889968290738,0,0,0,0,0,0,0,0,0,0,0,1.4377491329495,0,0,0.868687840005475,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,5.40724239980099,7.13715955188647,4.57337003598411,4.80279801470124,0.902838299183157,0,0,0,0.553107505625109,2.25897397617015,0.195801157462741,0,0,0,0.106727557803444,0.909382714338778,0,1.20956117331872,3.96972492510043,11.8165719431808,11.507063871756,3.33161788064823,5.11707249066703,6.91671860917512,8.90508398669946,0.616838775210622,1.42049380250502,0,0,0.348631135379878,0,2.20557117333613,0.184161977871793,0.918515585316854,0.182091168006717,0.917870904715969,0,0,0,0,0.105551628892876,2.27466768141793,0.850468526382578,2.37507507712353,3.08454505380579,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0,0.826424576804891,1.15314040419064,1.14851441245126,0.10115778085555,0,3.1481234683064,0.6970372701606,0.308033580176089,0,0.869932992075073,0.9266210955196,0.143124886741991,0,0.949138274156178,0.38126038784765,0.511795582622668,0,0,0.78494864019923,0.539617372749944,0,0.353437207037059,1.2130948894399,0,0.842516912477962,0.48763373908959,0.243713489631284,2.11300293513511,0,0.424216295861138,0,0,1.32687795048244,1.75380354101505,0.578775534266688,0.655894752046633,1.62328301570163,1.239293992399,1.12678241012897,0.430234056612155,0.687743287091848,2.85336841185,0,0.211107635297664,0.658589785919804,0.379473173765715,0.349934720244983,1.05844323998063,0,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,2.52695740227655,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,3.81991175580304,0.296964680832639,7.98617825458003,0,0,0.222617410045812,0,0,0,0,0,0.306806047506464,0,6.53183134089796,1.79736702294654,0.179021174675609,0,0.0986434056369336,0,2.22273980289274,0,0,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0.50850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| ||
|short_description=p@chr15:39888616..39888632,+ | |short_description=p@chr15:39888616..39888632,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888616..39888632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888616..39888632, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.39e-15 | 76 |
skin fibroblast | 6.59e-09 | 23 |
preadipocyte | 1.02e-08 | 12 |
endothelial cell of vascular tree | 6.75e-08 | 24 |
multi fate stem cell | 1.45e-07 | 427 |
somatic stem cell | 3.53e-07 | 433 |
endothelial cell | 4.09e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.93e-12 | 68 |
omentum | 4.66e-11 | 6 |
peritoneum | 4.66e-11 | 6 |
abdominal cavity | 4.66e-11 | 6 |
visceral peritoneum | 4.66e-11 | 6 |
artery | 1.74e-10 | 42 |
arterial blood vessel | 1.74e-10 | 42 |
arterial system | 1.74e-10 | 42 |
epithelial tube open at both ends | 2.34e-09 | 59 |
blood vessel | 2.34e-09 | 59 |
blood vasculature | 2.34e-09 | 59 |
vascular cord | 2.34e-09 | 59 |
vasculature | 2.38e-09 | 78 |
vascular system | 2.38e-09 | 78 |
somatic layer of lateral plate mesoderm | 3.27e-09 | 8 |
amnion | 4.03e-08 | 7 |
splanchnic layer of lateral plate mesoderm | 4.10e-08 | 83 |
integument | 9.61e-08 | 46 |
integumental system | 9.61e-08 | 46 |
extraembryonic membrane | 1.80e-07 | 14 |
membranous layer | 1.80e-07 | 14 |
aorta | 3.21e-07 | 21 |
aortic system | 3.21e-07 | 21 |
skin of body | 3.38e-07 | 41 |
systemic artery | 3.53e-07 | 33 |
systemic arterial system | 3.53e-07 | 33 |
organ component layer | 5.47e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.85e-08 | 5 |
myotonic disease | 2.85e-08 | 5 |
muscle tissue disease | 2.85e-08 | 5 |
myopathy | 2.85e-08 | 5 |
muscular disease | 2.85e-08 | 5 |
myotonic dystrophy | 2.85e-08 | 5 |