FFCP PHASE1:Hg19::chr15:39888860..39888866,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39888860..39888866,+ to FFCP PHASE1:Hg19::chr15:39888860..39888866,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39888860..39888866,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888860..39888866,+ | |||
|id=chr15:39888860..39888866,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.03e-16!75;CL:0000055!2.83e-14!180;CL:0002371!5.10e-10!591;CL:0002334!8.73e-10!12;CL:0000144!2.01e-09!625;CL:0000548!1.32e-08!679;CL:0000004!1.32e-08!679;CL:0000255!1.32e-08!679;CL:0000012!2.38e-08!682;CL:0000220!4.18e-08!246;CL:0000222!5.63e-08!119;CL:0002321!7.07e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002580;9.86e-14;3!CL:0002334;1.94e-12;12!CL:0002617;3.97e-10;2!CL:0002620;8.15e-08;23!CL:0000057;3.28e-07;73!CL:0002138;7.28e-07;6!CL:0000197;8.64e-07;6!CL:0000098;8.64e-07;6!CL:0002167;8.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.65e-17,76;CL:0002580,4.41e-14,3;CL:0002334,1.61e-12,12;CL:0002617,3.83e-10,2;CL:0002620,7.96e-08,23;CL:0000197,8.59e-07,6;CL:0000098,8.59e-07,6;CL:0002167,8.59e-07,6;CL:0005020,8.76e-07,6;CL:0002138,8.76e-07,6;CL:0005022,8.76e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;7.28e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.53e-08;5!DOID:450;4.53e-08;5!DOID:66;4.53e-08;5!DOID:423;4.53e-08;5!DOID:0080000;4.53e-08;5!DOID:11722;4.53e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.47e-08,5;DOID:450,6.47e-08,5;DOID:66,6.47e-08,5;DOID:423,6.47e-08,5;DOID:0080000,6.47e-08,5;DOID:11722,6.47e-08,5;DOID:1192,9.91e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!8.07e-08!69;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0002049!2.30e-07!79;UBERON:0007798!2.30e-07!79;UBERON:0004872!2.43e-07!84;UBERON:0003102!5.42e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.63e-11;6!UBERON:0002358;1.63e-11;6!UBERON:0003684;1.63e-11;6!UBERON:0001178;1.63e-11;6!UBERON:0000310;6.77e-11;10!UBERON:0001443;7.13e-10;11!UBERON:0004457;1.09e-07;9!UBERON:0000042;1.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.09e-11,6;UBERON:0002358,2.09e-11,6;UBERON:0003684,2.09e-11,6;UBERON:0001178,2.09e-11,6;UBERON:0000310,4.51e-11,10;UBERON:0001443,4.95e-10,11 | |||
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|phase1_expression=3.63356758541113,3.63970890614671,1.83240725324762,2.00146596706261,0.446961094427288,0.872338524100369,0,0,0,0,0.697801167972428,0.436882744260345,0.791300934685361,0,0,0.672325146451775,0,0,1.95173119516203,0,0,0,0,0,0.376627918784408,0,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,1.03423704220986,0.645484683583826,0,0.564727018627814,0,0,0,0,0,0,0,0,0.290209238628584,0,0,1.25624332628372,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.189069634328136,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0.550236083880135,0,1.03366703667732,0.35576626268671,0,0,1.52054421143703,0.732186172644509,0.735326160691737,0,0.714397826272638,0,0.225222960966644,0,0,0.366403487860815,0,0,0.872188104285069,3.47880366186723,0.506522046658319,0.794455084879313,0.286836620748814,0.354668382198357,0,0,2.22000793575444,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,1.97813543422845,0,0,0,0,0,0.438977620880838,1.83892677479412,1.20190447125277,0.567160915800105,2.87023417102179,1.06778694409284,0.423863802319124,0.300091096084402,1.23663035086127,1.54584324027377,0.744467425326359,1.85653965465393,1.26668106709558,1.26216887122057,0.920498986422993,0,0,0.604512589365842,0.847802961552438,0.386521706326594,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.502644862058154,0.0925884451585296,0,0,0,0,0,0.577465791044295,4.1668696131895,1.52203321787679,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,1.45579603071565,2.67643483195743,1.26161932027148,0.819989904948992,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0,0.606255142892519,0,0,1.98486246255021,5.83155498494637,2.80660094433074,0.768834895534206,1.02341449813341,2.73451665944133,2.96836132889982,0.154209693802656,0.355123450626254,0.246381468041427,0,0.116210378459959,0,1.00253235151642,0,0.68888668898764,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.765676274967505,0,0,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,2.11300293513511,0.136499911407986,0.282810863907425,0,0.551365343546124,0,1.31535265576129,0.578775534266688,0,0.811641507850816,0.6196469961995,0,0.573645408816206,0.0982490410131212,1.07001315444375,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0.227884111694002,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,2.3885753321917,0.800055529326307,0,0.336749488765919,1.26184898228651,0,0,0,0.680117776536817,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,1.84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| ||
|short_description=p@chr15:39888860..39888866,+ | |||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888860..39888866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888860..39888866, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.65e-17 | 76 |
preadipocyte of the breast | 4.41e-14 | 3 |
preadipocyte | 1.61e-12 | 12 |
adipocyte of breast | 3.83e-10 | 2 |
skin fibroblast | 7.96e-08 | 23 |
receptor cell | 8.59e-07 | 6 |
sensory epithelial cell | 8.59e-07 | 6 |
olfactory epithelial cell | 8.59e-07 | 6 |
lymphangioblast | 8.76e-07 | 6 |
endothelial cell of lymphatic vessel | 8.76e-07 | 6 |
vascular lymphangioblast | 8.76e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.09e-11 | 6 |
peritoneum | 2.09e-11 | 6 |
abdominal cavity | 2.09e-11 | 6 |
visceral peritoneum | 2.09e-11 | 6 |
breast | 4.51e-11 | 10 |
chest | 4.95e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.47e-08 | 5 |
myotonic disease | 6.47e-08 | 5 |
muscle tissue disease | 6.47e-08 | 5 |
myopathy | 6.47e-08 | 5 |
muscular disease | 6.47e-08 | 5 |
myotonic dystrophy | 6.47e-08 | 5 |
peripheral nervous system neoplasm | 9.91e-07 | 3 |