FFCP PHASE1:Hg19::chr15:81172081..81172103,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:81172081..81172103,+ | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81172081..81172103,+ | |||
|id=chr15:81172081..81172103,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.99e-23!75;CL:0000055!1.21e-19!180;CL:0002334!2.74e-12!12;CL:0000048!2.57e-10!430;CL:0000723!6.19e-10!436;CL:0002620!1.76e-09!23;CL:0000034!1.91e-09!444;CL:0000630!3.85e-09!9;CL:0002579!8.86e-09!3;CL:0000135!2.28e-08!3;CL:0000386!2.28e-08!3;CL:0000388!2.28e-08!3;CL:0002580!2.39e-08!3;CL:0000499!3.36e-08!27;CL:0002320!8.10e-08!365;CL:0000134!3.02e-07!358;CL:0000136!4.14e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002579;8.76e-27;3!CL:0000135;2.03e-25;3!CL:0000388;2.03e-25;3!CL:0002334;2.44e-25;12!CL:0002617;3.37e-17;2!CL:0000136;6.55e-16;13!CL:0002615;2.47e-12;3!CL:0002580;3.19e-12;3!CL:0000511;4.46e-10;1!CL:0002625;4.46e-10;1!CL:0000216;4.46e-10;1!CL:0002581;5.79e-10;1!CL:0002616;8.53e-10;1!CL:0002591;1.83e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,8.05e-27,3;CL:0002334,1.98e-25,12;CL:0000135,2.21e-25,3;CL:0000388,2.21e-25,3;CL:0000057,3.70e-22,76;CL:0002617,3.10e-17,2;CL:0000136,9.46e-14,15;CL:0002580,2.69e-12,3;CL:0002615,2.85e-12,3;CL:0000511,4.87e-10,1;CL:0002625,4.87e-10,1;CL:0000216,4.87e-10,1;CL:0002581,5.31e-10,1;CL:0002616,8.91e-10,1;CL:0002591,2.08e-09,1;CL:0000134,7.10e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.85e-11!5;DOID:450!2.85e-11!5;DOID:66!2.85e-11!5;DOID:423!2.85e-11!5;DOID:0080000!2.85e-11!5;DOID:11722!2.85e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.25e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.03e-11!6;UBERON:0002358!5.03e-11!6;UBERON:0003684!5.03e-11!6;UBERON:0001178!5.03e-11!6;UBERON:0002199!6.09e-10!45;UBERON:0002416!6.09e-10!45;UBERON:0004457!1.09e-09!12;UBERON:0000042!1.09e-09!12;UBERON:0002097!6.70e-09!40;UBERON:0003102!8.04e-09!95;UBERON:0000043!2.28e-08!3;UBERON:0002384!8.75e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.09e-36;6!UBERON:0002358;8.09e-36;6!UBERON:0003684;8.09e-36;6!UBERON:0001178;8.09e-36;6!UBERON:0004457;1.11e-33;9!UBERON:0000042;1.11e-33;9!UBERON:0007846;2.03e-25;3!UBERON:0000043;2.03e-25;3!UBERON:0007845;2.03e-25;3!UBERON:0005406;5.06e-18;2!UBERON:0000310;1.83e-13;10!UBERON:0001443;2.93e-12;11!UBERON:0001136;4.46e-10;1!UBERON:0001343;4.46e-10;1!UBERON:0004910;4.46e-10;1!UBERON:0004813;4.46e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.02e-36,6;UBERON:0002358,9.02e-36,6;UBERON:0003684,9.02e-36,6;UBERON:0001178,9.02e-36,6;UBERON:0007846,2.21e-25,3;UBERON:0000043,2.21e-25,3;UBERON:0007845,2.21e-25,3;UBERON:0004457,4.59e-25,12;UBERON:0000042,4.59e-25,12;UBERON:0005406,4.85e-18,2;UBERON:0000310,1.60e-13,10;UBERON:0001443,2.60e-12,11;UBERON:0001136,4.87e-10,1;UBERON:0001343,4.87e-10,1;UBERON:0004910,4.87e-10,1;UBERON:0005154,4.87e-10,1;UBERON:0005295,4.87e-10,1;UBERON:0004813,4.87e-10,1;UBERON:0005297,4.87e-10,1;UBERON:0005294,4.87e-10,1;UBERON:0010141,4.87e-10,1;UBERON:0005891,4.87e-10,1;UBERON:0004458,9.26e-08,49;UBERON:0002384,2.69e-07,371;UBERON:0004923,3.77e-07,66 | |||
|phase1_expression=1.09007027562334,1.92690471501885,4.22863212287913,3.00219895059391,0,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.397227542439656,4.01571269048339,0,1.68203280042692,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0.612975591598039,1.50238058906597,0,0.358779271377724,0.213557388818567,1.05965950579781,0.600182192168805,0.412210116953756,0.257640540045629,0.744467425326359,0.337552664482532,0,0,0.552299391853796,3.71785930683267,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.695068915744663,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.72161711728165,0.767309866440312,3.64858122762996,7.68834895534206,6.65219423786715,6.59501076688791,4.45254199334973,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42735719376638,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.189403005275089,0.50313580350515,0,0,0.907385542579434,0,0.295710299979268,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.453411851024545,0.694567422971502,0,0,0,0.877136198314828,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,1.48798007266701,3.23522940041993,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:81172081..81172103,+ | |||
}} |
Latest revision as of 04:48, 25 July 2015
Short description: | p@chr15:81172081..81172103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81172081..81172103, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 8.05e-27 | 3 |
preadipocyte | 1.98e-25 | 12 |
fibrocyte | 2.21e-25 | 3 |
tendon cell | 2.21e-25 | 3 |
fibroblast | 3.70e-22 | 76 |
adipocyte of breast | 3.10e-17 | 2 |
fat cell | 9.46e-14 | 15 |
preadipocyte of the breast | 2.69e-12 | 3 |
adipocyte of omentum tissue | 2.85e-12 | 3 |
androgen binding protein secreting cell | 4.87e-10 | 1 |
seminiferous tubule epithelial cell | 4.87e-10 | 1 |
Sertoli cell | 4.87e-10 | 1 |
perirenal preadipocyte | 5.31e-10 | 1 |
perirenal adipocyte cell | 8.91e-10 | 1 |
smooth muscle cell of the pulmonary artery | 2.08e-09 | 1 |
mesenchymal cell | 7.10e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.02e-36 | 6 |
peritoneum | 9.02e-36 | 6 |
abdominal cavity | 9.02e-36 | 6 |
visceral peritoneum | 9.02e-36 | 6 |
dense regular connective tissue | 2.21e-25 | 3 |
tendon | 2.21e-25 | 3 |
regular connective tissue | 2.21e-25 | 3 |
cavity lining | 4.59e-25 | 12 |
serous membrane | 4.59e-25 | 12 |
perirenal fat | 4.85e-18 | 2 |
breast | 1.60e-13 | 10 |
chest | 2.60e-12 | 11 |
mesothelium | 4.87e-10 | 1 |
seminiferous tubule of testis | 4.87e-10 | 1 |
epithelium of male gonad | 4.87e-10 | 1 |
epithelial cord | 4.87e-10 | 1 |
sex cord | 4.87e-10 | 1 |
seminiferous tubule epithelium | 4.87e-10 | 1 |
testis sex cord | 4.87e-10 | 1 |
genital ridge | 4.87e-10 | 1 |
primitive sex cord of indifferent gonad | 4.87e-10 | 1 |
coelomic epithelium | 4.87e-10 | 1 |
body cavity or lining | 9.26e-08 | 49 |
connective tissue | 2.69e-07 | 371 |
organ component layer | 3.77e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.25e-09 | 1 |