FFCP PHASE1:Hg19::chr15:81212437..81212457,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:81212437..81212457,+ to FFCP PHASE1:Hg19::chr15:81212437..81212457,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:81212437..81212457,+ | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81212437..81212457,+ | |||
|id=chr15:81212437..81212457,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.86e-26!75;CL:0000055!2.59e-22!180;CL:0002620!1.83e-15!23;CL:0000048!3.89e-10!430;CL:0000723!1.16e-09!436;CL:0000034!4.70e-09!444;CL:0000192!8.94e-09!42;CL:0000514!8.94e-09!42;CL:0000499!3.12e-08!27;CL:0000680!2.09e-07!57;CL:0000056!2.09e-07!57;CL:0000355!2.09e-07!57;CL:1000306!4.30e-07!4;CL:0002547!4.30e-07!4;CL:0002334!7.76e-07!12;CL:0000359!8.85e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.45e-15;12!CL:0002579;1.06e-12;3!CL:0002580;3.66e-12;3!CL:0000135;3.80e-12;3!CL:0000388;3.80e-12;3!CL:0002615;4.66e-12;3!CL:0002620;1.07e-10;23!CL:0000136;4.60e-10;13!CL:0002617;9.73e-09;2!CL:1000306;1.71e-08;4!CL:0002547;1.71e-08;4!CL:0000057;7.98e-08;73!CL:0000499;6.31e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.98e-26,76;CL:0002334,4.42e-15,12;CL:0002579,1.06e-12,3;CL:0002580,3.54e-12,3;CL:0000135,3.81e-12,3;CL:0000388,3.81e-12,3;CL:0002615,4.94e-12,3;CL:0002620,1.11e-10,23;CL:0000048,2.01e-09,427;CL:0000723,3.83e-09,433;CL:0000034,8.81e-09,441;CL:0002617,9.21e-09,2;CL:0000136,1.26e-08,15;CL:1000306,1.69e-08,4;CL:0002547,1.69e-08,4;CL:0000134,1.17e-07,354;CL:0002320,2.46e-07,361;CL:0000499,7.12e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.21e-08!5;DOID:450!2.21e-08!5;DOID:66!2.21e-08!5;DOID:423!2.21e-08!5;DOID:0080000!2.21e-08!5;DOID:11722!2.21e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.14e-11;5!DOID:450;3.14e-11;5!DOID:66;3.14e-11;5!DOID:423;3.14e-11;5!DOID:0080000;3.14e-11;5!DOID:11722;3.14e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.82e-11,5;DOID:450,3.82e-11,5;DOID:66,3.82e-11,5;DOID:423,3.82e-11,5;DOID:0080000,3.82e-11,5;DOID:11722,3.82e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.08e-11!40;UBERON:0003688!2.99e-11!6;UBERON:0002358!2.99e-11!6;UBERON:0003684!2.99e-11!6;UBERON:0001178!2.99e-11!6;UBERON:0002199!9.86e-10!45;UBERON:0002416!9.86e-10!45;UBERON:0003102!4.90e-09!95;UBERON:0004457!9.42e-09!12;UBERON:0000042!9.42e-09!12;UBERON:0000475!3.92e-07!365;UBERON:0000415!4.30e-07!4;UBERON:0007240!4.30e-07!4;UBERON:0005742!4.30e-07!4;UBERON:0005734!4.30e-07!4;UBERON:0004664!4.30e-07!4;UBERON:0004663!4.30e-07!4;UBERON:0000914!5.33e-07!83;UBERON:0002329!5.33e-07!83;UBERON:0003077!5.33e-07!83;UBERON:0003059!5.33e-07!83;UBERON:0007282!5.33e-07!83;UBERON:0009618!5.33e-07!83;UBERON:0007285!5.33e-07!83;UBERON:0002100!6.31e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.28e-26;9!UBERON:0000042;5.28e-26;9!UBERON:0003688;5.25e-23;6!UBERON:0002358;5.25e-23;6!UBERON:0003684;5.25e-23;6!UBERON:0001178;5.25e-23;6!UBERON:0007846;3.80e-12;3!UBERON:0000043;3.80e-12;3!UBERON:0007845;3.80e-12;3!UBERON:0000310;2.09e-09;10!UBERON:0005406;7.47e-09;2!UBERON:0001443;1.63e-08;11!UBERON:0004797;1.71e-08;4!UBERON:0000415;1.71e-08;4!UBERON:0007240;1.71e-08;4!UBERON:0005742;1.71e-08;4!UBERON:0005734;1.71e-08;4!UBERON:0004664;1.71e-08;4!UBERON:0004663;1.71e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.59e-23,6;UBERON:0002358,5.59e-23,6;UBERON:0003684,5.59e-23,6;UBERON:0001178,5.59e-23,6;UBERON:0004457,3.73e-19,12;UBERON:0000042,3.73e-19,12;UBERON:0007846,3.81e-12,3;UBERON:0000043,3.81e-12,3;UBERON:0007845,3.81e-12,3;UBERON:0000310,2.01e-09,10;UBERON:0005406,7.35e-09,2;UBERON:0001443,1.57e-08,11;UBERON:0000415,1.69e-08,4;UBERON:0007240,1.69e-08,4;UBERON:0005742,1.69e-08,4;UBERON:0005734,1.69e-08,4;UBERON:0004664,1.69e-08,4;UBERON:0004663,1.69e-08,4;UBERON:0002097,4.06e-08,41;UBERON:0002384,1.52e-07,371;UBERON:0002199,5.26e-07,46;UBERON:0002416,5.26e-07,46 | |||
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|phase1_expression=4.90531624030503,9.20632252731228,5.3562673556469,9.00659685178174,2.68176656656373,8.72338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0.50133791063589,1.30361867064741,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9515512271251,1.2663051166458,1.58891016975863,5.73673241497627,0.709336764396714,6.16745360156538,0,0.74000264525148,0.311211035399766,0,0,0.454072282934794,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,1.97813543422845,0,0.718618141816238,0,0,0,0,7.04921930337745,1.50238058906597,0,1.25572744982203,1.70845911054854,2.7551147150743,1.20036438433761,0.824420233907511,2.06112432036503,0.744467425326359,0.675105328965065,0.292311015483596,2.27190396819703,1.74894807420369,4.68773564774555,0.710019185033229,0.10075209822764,1.3564847384839,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,1.12948698808508,0.391602314925481,0,0,0,0,0,0,0.30239029332968,5.45837177201309,3.52962538562544,10.1037633995906,11.0199668359903,8.69902323413396,19.6241783795201,7.42090332224955,0,0,0,0,0,0,0,0,0.803701137152247,1.27463817604702,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.03419649220798,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,1.25924938732256,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,0.190630193923825,0,0,0.636406495851874,0,0.539617372749944,0.54907405947211,0,0,1.58510321173008,0.421258456238981,0,0.243713489631284,2.11300293513511,0.272999822815972,1.27264888758341,1.13008116620243,0,1.32687795048244,0,0,0.655894752046633,0,0,0,0.286822704408103,0,0,0,1.47775344708365,5.92730807327823,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79935628895627,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,3.43812353135966,0,0,0,0,0,0,0,0,0.720599767084807,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.570930667089935,0,0,0,0,0,0.554805861502613,0.757612021100357,1.50940741051545,1.77962244319307,0,1.81477108515887,0.15543720058278,0.887130899937803,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,1.81364740409818,1.389134845943,0,0,0,3.28926074368061,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.918736432059601,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81189538150178,6.00828317220844,4.75889218336168,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|short_description=p@chr15:81212437..81212457,+ | |||
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Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81212437..81212457, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81212437..81212457, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.98e-26 | 76 |
preadipocyte | 4.42e-15 | 12 |
omentum preadipocyte | 1.06e-12 | 3 |
preadipocyte of the breast | 3.54e-12 | 3 |
fibrocyte | 3.81e-12 | 3 |
tendon cell | 3.81e-12 | 3 |
adipocyte of omentum tissue | 4.94e-12 | 3 |
skin fibroblast | 1.11e-10 | 23 |
multi fate stem cell | 2.01e-09 | 427 |
somatic stem cell | 3.83e-09 | 433 |
stem cell | 8.81e-09 | 441 |
adipocyte of breast | 9.21e-09 | 2 |
fat cell | 1.26e-08 | 15 |
fibroblast of tunica adventitia of artery | 1.69e-08 | 4 |
fibroblast of the aortic adventitia | 1.69e-08 | 4 |
mesenchymal cell | 1.17e-07 | 354 |
connective tissue cell | 2.46e-07 | 361 |
stromal cell | 7.12e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.59e-23 | 6 |
peritoneum | 5.59e-23 | 6 |
abdominal cavity | 5.59e-23 | 6 |
visceral peritoneum | 5.59e-23 | 6 |
cavity lining | 3.73e-19 | 12 |
serous membrane | 3.73e-19 | 12 |
dense regular connective tissue | 3.81e-12 | 3 |
tendon | 3.81e-12 | 3 |
regular connective tissue | 3.81e-12 | 3 |
breast | 2.01e-09 | 10 |
perirenal fat | 7.35e-09 | 2 |
chest | 1.57e-08 | 11 |
artery wall | 1.69e-08 | 4 |
tunica adventitia of artery | 1.69e-08 | 4 |
adventitia | 1.69e-08 | 4 |
tunica adventitia of blood vessel | 1.69e-08 | 4 |
aorta tunica adventitia | 1.69e-08 | 4 |
aorta wall | 1.69e-08 | 4 |
skin of body | 4.06e-08 | 41 |
connective tissue | 1.52e-07 | 371 |
integument | 5.26e-07 | 46 |
integumental system | 5.26e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.82e-11 | 5 |
myotonic disease | 3.82e-11 | 5 |
muscle tissue disease | 3.82e-11 | 5 |
myopathy | 3.82e-11 | 5 |
muscular disease | 3.82e-11 | 5 |
myotonic dystrophy | 3.82e-11 | 5 |