FFCP PHASE1:Hg19::chr16:367222..367228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:367222..367228,+ | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr16:367222..367228,+ | |description=CAGE_peak_at_chr16:367222..367228,+ | ||
|id=chr16:367222..367228,+ | |id=chr16:367222..367228,+ | ||
|ontology_enrichment_celltype=CL:0002620!8.52e-13!23;CL:0000057!1.11e-07!75 | |ontology_enrichment_celltype=CL:0002620!8.52e-13!23;CL:0000057!1.11e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.92e-26;6!CL:0002620;1.25e-19;23!CL:0000153;1.00e-17;9!CL:0000447;1.00e-17;9!CL:0000327;1.02e-10;15!CL:0002591;1.10e-10;1!CL:0002537;2.08e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.87e-26,6;CL:0000138,1.87e-26,6;CL:0002620,1.23e-19,23;CL:0000153,9.80e-18,9;CL:0000447,9.80e-18,9;CL:0000327,1.00e-10,15;CL:0002591,1.46e-10,1;CL:0002537,1.93e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.48e-09!5;DOID:450!2.48e-09!5;DOID:66!2.48e-09!5;DOID:423!2.48e-09!5;DOID:0080000!2.48e-09!5;DOID:11722!2.48e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:4235;5.04e-11;1!DOID:17;9.54e-09;5!DOID:450;9.54e-09;5!DOID:66;9.54e-09;5!DOID:423;9.54e-09;5!DOID:0080000;9.54e-09;5!DOID:11722;9.54e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,5.05e-11,1;DOID:17,9.73e-09,5;DOID:450,9.73e-09,5;DOID:66,9.73e-09,5;DOID:423,9.73e-09,5;DOID:0080000,9.73e-09,5;DOID:11722,9.73e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.93e-10!14;UBERON:0000158!2.93e-10!14;UBERON:0003124!7.07e-08!7;UBERON:0002097!9.32e-08!40;UBERON:0002199!2.45e-07!45;UBERON:0002416!2.45e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.49e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.03e-10,41;UBERON:0002199,1.80e-09,46;UBERON:0002416,1.80e-09,46 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,2.00146596706261,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,10.4817354191524,10.0267582127178,7.09747942908036,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,2.15267562826634,0.427114777637135,0.635795703478686,7.80236849819446,0.412210116953756,0.772921620136887,0.930584281657949,1.68776332241266,1.07180705677318,2.52433774244115,0.368199594569197,0,5.68015348026583,1.20902517873168,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.920771839728375,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.74129687641568,1.14499909393593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,1.67121139316383,1.18785872333055,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,1.07453304648892,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0.078493092850514,0,0,0,1.72742072974897,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0.0644578879735772,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449126010532934,0,0,0.813792356631477,0,0,0 | |phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,2.00146596706261,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,10.4817354191524,10.0267582127178,7.09747942908036,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,2.15267562826634,0.427114777637135,0.635795703478686,7.80236849819446,0.412210116953756,0.772921620136887,0.930584281657949,1.68776332241266,1.07180705677318,2.52433774244115,0.368199594569197,0,5.68015348026583,1.20902517873168,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.920771839728375,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,1.5740617341532,0,0,0,0,0.74129687641568,1.14499909393593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,1.67121139316383,1.18785872333055,0.614321404198464,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,1.07453304648892,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0.078493092850514,0,0,0,1.72742072974897,0.47775168788705,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0.0644578879735772,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449126010532934,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr16:367222..367228,+ | |short_description=p@chr16:367222..367228,+ | ||
}} | }} |
Latest revision as of 08:43, 25 July 2015
Short description: | p@chr16:367222..367228, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:367222..367228, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.87e-26 | 6 |
chondrocyte | 1.87e-26 | 6 |
skin fibroblast | 1.23e-19 | 23 |
GAG secreting cell | 9.80e-18 | 9 |
carbohydrate secreting cell | 9.80e-18 | 9 |
extracellular matrix secreting cell | 1.00e-10 | 15 |
smooth muscle cell of the pulmonary artery | 1.46e-10 | 1 |
amnion mesenchymal stem cell | 1.93e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.03e-10 | 41 |
integument | 1.80e-09 | 46 |
integumental system | 1.80e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 5.05e-11 | 1 |
musculoskeletal system disease | 9.73e-09 | 5 |
myotonic disease | 9.73e-09 | 5 |
muscle tissue disease | 9.73e-09 | 5 |
myopathy | 9.73e-09 | 5 |
muscular disease | 9.73e-09 | 5 |
myotonic dystrophy | 9.73e-09 | 5 |