FFCP PHASE1:Hg19::chr16:68867618..68867631,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:68867618..68867631,+ | |||
|coexpression_cluster_id=C3587 | |coexpression_cluster_id=C3587 | ||
|description=CAGE_peak_at_chr16:68867618..68867631,+ | |description=CAGE_peak_at_chr16:68867618..68867631,+ | ||
|id=chr16:68867618..68867631,+ | |id=chr16:68867618..68867631,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.30e-29!254;CL:0000223!6.21e-22!59;CL:0002076!2.13e-20!43;CL:0002368!4.77e-10!13;CL:0002251!4.95e-09!21;CL:0002077!2.61e-08!33;CL:0000039!9.68e-08!7;CL:0000586!9.68e-08!7;CL:0002202!8.25e-07!9;CL:0002632!8.25e-07!9 | |ontology_enrichment_celltype=CL:0000066!3.30e-29!254;CL:0000223!6.21e-22!59;CL:0002076!2.13e-20!43;CL:0002368!4.77e-10!13;CL:0002251!4.95e-09!21;CL:0002077!2.61e-08!33;CL:0000039!9.68e-08!7;CL:0000586!9.68e-08!7;CL:0002202!8.25e-07!9;CL:0002632!8.25e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.00e-19;42!CL:0002368;1.49e-11;13!CL:0002251;2.38e-09;20!CL:0000039;5.97e-08;7!CL:0000586;5.97e-08;7!CL:0002202;2.63e-07;9!CL:0002632;2.63e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.88e-26,253;CL:0002076,7.72e-24,42;CL:0000223,8.82e-23,58;CL:0002368,1.64e-11,13;CL:0002251,1.75e-09,20;CL:0000039,5.49e-08,7;CL:0000586,5.49e-08,7;CL:0002202,3.14e-07,9;CL:0002632,3.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.10e-12;58 | |||
|ontology_enrichment_disease=DOID:305!1.93e-16!106;DOID:1749!7.98e-11!14;DOID:0050687!9.99e-11!143 | |ontology_enrichment_disease=DOID:305!1.93e-16!106;DOID:1749!7.98e-11!14;DOID:0050687!9.99e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.09e-12;14!DOID:299;5.78e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.29e-12,14;DOID:305,1.57e-12,106;DOID:0050687,7.72e-09,143;DOID:299,4.89e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.00e-26!169;UBERON:0000925!1.00e-26!169;UBERON:0006595!1.00e-26!169;UBERON:0001007!1.45e-20!155;UBERON:0001555!1.45e-20!155;UBERON:0007026!1.45e-20!155;UBERON:0004921!3.64e-18!129;UBERON:0004185!3.64e-18!129;UBERON:0005911!4.73e-16!82;UBERON:0000077!8.21e-16!130;UBERON:0000466!5.14e-13!126;UBERON:0001041!7.66e-12!98;UBERON:0001004!1.81e-11!72;UBERON:0000464!1.05e-10!104;UBERON:0005153!3.87e-10!37;UBERON:0005177!1.43e-09!107;UBERON:0000161!4.02e-08!35;UBERON:0000065!4.13e-08!53;UBERON:0003929!6.29e-08!54;UBERON:0005178!8.77e-08!34;UBERON:0002224!8.77e-08!34;UBERON:0005157!9.93e-08!51;UBERON:0005181!2.19e-07!35;UBERON:0009569!2.44e-07!113;UBERON:0002530!3.12e-07!59;UBERON:0000344!8.05e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!1.00e-26!169;UBERON:0000925!1.00e-26!169;UBERON:0006595!1.00e-26!169;UBERON:0001007!1.45e-20!155;UBERON:0001555!1.45e-20!155;UBERON:0007026!1.45e-20!155;UBERON:0004921!3.64e-18!129;UBERON:0004185!3.64e-18!129;UBERON:0005911!4.73e-16!82;UBERON:0000077!8.21e-16!130;UBERON:0000466!5.14e-13!126;UBERON:0001041!7.66e-12!98;UBERON:0001004!1.81e-11!72;UBERON:0000464!1.05e-10!104;UBERON:0005153!3.87e-10!37;UBERON:0005177!1.43e-09!107;UBERON:0000161!4.02e-08!35;UBERON:0000065!4.13e-08!53;UBERON:0003929!6.29e-08!54;UBERON:0005178!8.77e-08!34;UBERON:0002224!8.77e-08!34;UBERON:0005157!9.93e-08!51;UBERON:0005181!2.19e-07!35;UBERON:0009569!2.44e-07!113;UBERON:0002530!3.12e-07!59;UBERON:0000344!8.05e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.57e-09;22!UBERON:0004921;1.19e-08;33!UBERON:0000160;1.68e-07;17!UBERON:0005911;2.66e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.00e-19,160;UBERON:0000925,1.00e-19,160;UBERON:0006595,1.00e-19,160;UBERON:0001007,1.64e-14,145;UBERON:0001555,1.64e-14,145;UBERON:0007026,1.64e-14,145;UBERON:0005911,6.52e-13,82;UBERON:0004921,2.24e-11,118;UBERON:0005153,6.59e-08,37;UBERON:0000160,1.32e-07,17;UBERON:0003929,1.51e-07,54;UBERON:0005409,1.80e-07,25;UBERON:0005157,8.02e-07,47;UBERON:0001004,9.49e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,5.40614660303319,5.58240934377942,3.9319446983431,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,5.51652734687356,1.50602959389125,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,1.82147644146271,3.33705998505986,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,2.72746120590835,1.72082757233402,1.34171076742555,1.59035721985782,3.25343040034651,0.621966330092223,4.03713361401005,14.2341170039574,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,7.60530208930985,1.96565443335525,1.77236972004421,0,5.65746817298322,0,4.17051084552777,1.1240175325762,3.41798506199545,2.77765335475589,0,0,0,0,0,0,0,0,3.95102198979638,0.858486162094873,0,0,0,0.93733833986777,1.00789276919316,1.98485136139341,4.74660170325096,3.48760726216754,3.06706143332169,0,0,0,0,0,0.825472625798197,0.381988425558278,0,1.71072446022705,0.205654985406647,7.20823338825402,4.57322292208925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,2.12189300012382,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,8.09758312263869,9.82481704486096,12.0626095506024,0,0,0,1.80479845162965,1.30926073077505,0,0,0.422206515571503,0,0,0,0,0,0,1.01950509218015,3.3243040357149,0,2.19259876645935,2.0914836081992,0,0,0,1.44257416306811,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,9.25595526021477,2.30628080838127,1.78657797492418,3.33820676823315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06199310170726,0.670302275535787,1.08890984861323,1.03558180854457,1.72202149068492,13.47771805341,4.87773168890343,2.29723400206959,1.01489521846434,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0.593929361665277,5.22173193568695,0,0,0,0,0,0,1.10513566212459,0.251932747854276,0,0,0,0.808815160325942,10.2042069565097,0,0.493217028184668,0,0,0,0,0,13.8026713375174,0.787139999965761,0.724999575434793,3.86897724170699,3.81380475439149,1.41832609060762,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,11.4327470308455,0.461701551022782,0,10.6059396018508,10.3221291071238,19.1219374582734,1.5950057986596,0.915975934018623,1.06606955203727,0,0,0,0,0,0,0,1.27149263184303,0,2.28525931422807,13.1458356433565,0,1.99052386215701,3.44984501563023,6.11030144933625,0,0,0,0,0,0.234264445725339,0,2.54364004611717,0,2.36750641709634,4.83962864194656,0.30607276163049,0,0,0,0,0,0,0,3.41531455235751,0,5.0332324117188,4.89961987071888,2.00236175134926,1.57254001417827,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,5.67099009930929,1.04206466326994,4.69596588426576,0,3.89044126316086,0,0,0.14405479798815,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,4.3929380109778,0,0,0,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0,3.53656926623042,3.85110422472255,6.23160507043778,1.349843349309,1.5476039091159,0,3.68978156359193,0.86686278029118,0.157363764404994,0.105600336519406,0,1.91915197319445,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0.13223260174269,3.25064991980226,0,0.747511887973863,0.471612915298998,1.24271716604159,0,0,0,3.83004754662109,0,0,0,0,2.66991963625398,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,1.14186133417987,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.579845934246,0,0,0,0,0,0.926404341482917,1.31570429747224,0,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0,1.47918486351039,0,0,0,0,0,5.59518030877778,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,3.4351701475359,0.353909170043221,2.75142897782519,3.69682131681082,0,0,0,0.150420656698515,0,3.90757005616546,16.5001217523296,0,1.92212912082159,0,0,0,0,0,1.64477330057155,0.992422356778588,0,5.74930924378179,0,0,0,0.227662191351298,1.50794029276486,0.115233987555779,0,0,0.131545547125698,1.18193840883968,1.00108261702862,0.313972371402056,0,2.24217730651031,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,2.15113679410139,0,0,2.11693525095465,5.4985648450572,0,0,16.1071821788821,1.17780280338292,2.92603019957447,0,0,0,4.37139893753226,1.16969731731053,0,0,0.67767649223376,0,0.452888530700021,4.70762364458462,2.62271472604749,5.64380755633827,0,0.707029641304878,0,0,1.2679671827502,0,0,0.128915775947154,0.0999411559249289,8.03492723725459,2.47026410200984,8.66606760243017,2.19100916473955,1.83491713361816,0.143339583151451,0,0,0,7.40637576721561,0,0,0.865253124247578,0,0,0,2.44773191380756,0.534434810531121,3.58390108185895,3.76061308938563,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| ||
|short_description=p@chr16:68867618..68867631,+ | |short_description=p@chr16:68867618..68867631,+ | ||
}} | }} |
Latest revision as of 11:47, 25 July 2015
Short description: | p@chr16:68867618..68867631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68867618..68867631, + |
Coexpression cluster: | C3587_choriocarcinoma_breast_serous_pancreatic_colon_Urothelial_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.88e-26 | 253 |
endo-epithelial cell | 7.72e-24 | 42 |
endodermal cell | 8.82e-23 | 58 |
respiratory epithelial cell | 1.64e-11 | 13 |
epithelial cell of alimentary canal | 1.75e-09 | 20 |
germ line cell | 5.49e-08 | 7 |
germ cell | 5.49e-08 | 7 |
epithelial cell of tracheobronchial tree | 3.14e-07 | 9 |
epithelial cell of lower respiratory tract | 3.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.00e-19 | 160 |
endoderm | 1.00e-19 | 160 |
presumptive endoderm | 1.00e-19 | 160 |
digestive system | 1.64e-14 | 145 |
digestive tract | 1.64e-14 | 145 |
primitive gut | 1.64e-14 | 145 |
endo-epithelium | 6.52e-13 | 82 |
subdivision of digestive tract | 2.24e-11 | 118 |
epithelial bud | 6.59e-08 | 37 |
intestine | 1.32e-07 | 17 |
gut epithelium | 1.51e-07 | 54 |
gastrointestinal system | 1.80e-07 | 25 |
epithelial fold | 8.02e-07 | 47 |
respiratory system | 9.49e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.29e-12 | 14 |
carcinoma | 1.57e-12 | 106 |
cell type cancer | 7.72e-09 | 143 |
adenocarcinoma | 4.89e-07 | 25 |