FFCP PHASE1:Hg19::chr16:82104515..82104534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:82104515..82104534,+ | |||
|description=CAGE_peak_at_chr16:82104515..82104534,+ | |description=CAGE_peak_at_chr16:82104515..82104534,+ | ||
|id=chr16:82104515..82104534,+ | |id=chr16:82104515..82104534,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.57e-29!43;CL:0000223!6.90e-20!59;CL:0000066!2.66e-17!254;CL:0002368!3.27e-15!13;CL:0002251!1.49e-12!21;CL:0002159!1.77e-11!13;CL:0002166!5.46e-11!3;CL:0002621!1.42e-10!3;CL:0000076!6.64e-10!62;CL:0000317!2.25e-07!2;CL:1000448!2.25e-07!2;CL:0002308!2.25e-07!2;CL:0002140!2.25e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.57e-29!43;CL:0000223!6.90e-20!59;CL:0000066!2.66e-17!254;CL:0002368!3.27e-15!13;CL:0002251!1.49e-12!21;CL:0002159!1.77e-11!13;CL:0002166!5.46e-11!3;CL:0002621!1.42e-10!3;CL:0000076!6.64e-10!62;CL:0000317!2.25e-07!2;CL:1000448!2.25e-07!2;CL:0002308!2.25e-07!2;CL:0002140!2.25e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.85e-37;13!CL:0002166;5.15e-31;3!CL:0002076;6.95e-19;42!CL:0002159;8.28e-18;14!CL:0002621;1.85e-14;3!CL:0000307;4.42e-14;3!CL:0002252;3.45e-11;1!CL:0002202;2.02e-10;9!CL:0002632;2.02e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.98e-37,13;CL:0002166,2.66e-31,3;CL:0002076,1.99e-22,42;CL:0002159,7.59e-18,14;CL:0000223,7.33e-16,58;CL:0002621,1.51e-14,3;CL:0000068,3.39e-14,3;CL:0000069,3.39e-14,3;CL:0000307,3.39e-14,3;CL:0000377,3.39e-14,3;CL:0002252,3.63e-11,1;CL:0002202,1.48e-10,9;CL:0002632,1.48e-10,9;CL:0000066,6.82e-09,253;CL:0002077,2.80e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000377;4.42e-14;3!UBERON:0009143;3.45e-11;1!UBERON:0008801;3.45e-11;1!CL:0000223;6.76e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!1.45e-23!14 | |ontology_enrichment_disease=DOID:1749!1.45e-23!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001708;1.93e-23;4!UBERON:0008895;1.93e-23;4!UBERON:0011159;6.94e-19;5!UBERON:0001949;1.85e-14;3!UBERON:0001043;4.42e-14;3!UBERON:0003126;2.01e-13;7!UBERON:0001005;2.01e-13;7!UBERON:0001831;3.45e-11;1!UBERON:0001567;3.45e-11;1!UBERON:0007196;7.68e-11;15!UBERON:0001558;7.68e-11;15!UBERON:0005178;2.45e-09;34!UBERON:0002224;2.45e-09;34!UBERON:0011137;6.89e-09;11!UBERON:0010323;6.89e-09;11!UBERON:0000065;8.62e-09;44!UBERON:0005181;2.46e-08;35!UBERON:0001004;4.41e-07;65!UBERON:0001041;7.05e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.18e-23,4;UBERON:0008895,1.18e-23,4;UBERON:0011159,4.68e-19,5;UBERON:0010188,5.53e-16,6;UBERON:0002539,5.53e-16,6;UBERON:0008816,5.53e-16,6;UBERON:0001004,9.30e-15,74;UBERON:0001949,1.51e-14,3;UBERON:0001043,6.58e-14,3;UBERON:0009143,6.58e-14,3;UBERON:0003126,1.74e-13,7;UBERON:0001005,1.74e-13,7;UBERON:0001831,5.43e-11,1;UBERON:0001567,5.43e-11,1;UBERON:0008801,5.43e-11,1;UBERON:0000065,5.70e-11,54;UBERON:0007196,6.09e-11,15;UBERON:0001558,6.09e-11,15;UBERON:0005178,4.15e-10,34;UBERON:0002224,4.15e-10,34;UBERON:0005181,8.30e-10,35;UBERON:0010323,5.79e-09,11;UBERON:0004119,1.88e-08,160;UBERON:0000925,1.88e-08,160;UBERON:0006595,1.88e-08,160;UBERON:0011137,3.83e-07,14 | |||
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| ||
|short_description=p@chr16:82104515..82104534,+ | |short_description=p@chr16:82104515..82104534,+ | ||
}} | }} |
Latest revision as of 12:46, 25 July 2015
Short description: | p@chr16:82104515..82104534, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82104515..82104534, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.98e-37 | 13 |
epithelial cell of Malassez | 2.66e-31 | 3 |
endo-epithelial cell | 1.99e-22 | 42 |
general ecto-epithelial cell | 7.59e-18 | 14 |
endodermal cell | 7.33e-16 | 58 |
gingival epithelial cell | 1.51e-14 | 3 |
duct epithelial cell | 3.39e-14 | 3 |
branched duct epithelial cell | 3.39e-14 | 3 |
tracheal epithelial cell | 3.39e-14 | 3 |
tracheoblast | 3.39e-14 | 3 |
epithelial cell of esophagus | 3.63e-11 | 1 |
epithelial cell of tracheobronchial tree | 1.48e-10 | 9 |
epithelial cell of lower respiratory tract | 1.48e-10 | 9 |
epithelial cell | 6.82e-09 | 253 |
ecto-epithelial cell | 2.80e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.18e-23 | 4 |
splanchnocranium | 1.18e-23 | 4 |
primary subdivision of cranial skeletal system | 4.68e-19 | 5 |
protuberance | 5.53e-16 | 6 |
pharyngeal arch | 5.53e-16 | 6 |
embryonic head | 5.53e-16 | 6 |
respiratory system | 9.30e-15 | 74 |
gingival epithelium | 1.51e-14 | 3 |
esophagus | 6.58e-14 | 3 |
esophageal region | 6.58e-14 | 3 |
trachea | 1.74e-13 | 7 |
respiratory airway | 1.74e-13 | 7 |
parotid gland | 5.43e-11 | 1 |
cheek | 5.43e-11 | 1 |
parotid gland primordium | 5.43e-11 | 1 |
respiratory tract | 5.70e-11 | 54 |
tracheobronchial tree | 6.09e-11 | 15 |
lower respiratory tract | 6.09e-11 | 15 |
thoracic cavity element | 4.15e-10 | 34 |
thoracic cavity | 4.15e-10 | 34 |
thoracic segment organ | 8.30e-10 | 35 |
cranial skeletal system | 5.79e-09 | 11 |
endoderm-derived structure | 1.88e-08 | 160 |
endoderm | 1.88e-08 | 160 |
presumptive endoderm | 1.88e-08 | 160 |
axial skeletal system | 3.83e-07 | 14 |