FFCP PHASE1:Hg19::chr17:27504928..27504983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27504928..27504983,- | |||
|description=CAGE_peak_at_chr17:27504928..27504983,- | |description=CAGE_peak_at_chr17:27504928..27504983,- | ||
|id=chr17:27504928..27504983,- | |id=chr17:27504928..27504983,- | ||
|ontology_enrichment_celltype=CL:0000066!3.86e-30!254;CL:0000223!1.65e-19!59;CL:0002076!2.61e-15!43;CL:0002251!1.41e-08!21;CL:0002368!6.42e-08!13 | |ontology_enrichment_celltype=CL:0000066!3.86e-30!254;CL:0000223!1.65e-19!59;CL:0002076!2.61e-15!43;CL:0002251!1.41e-08!21;CL:0002368!6.42e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002202;3.47e-13;9!CL:0002632;3.47e-13;9!CL:0002076;7.52e-09;42!CL:0002368;8.74e-09;13!CL:0002328;1.02e-08;3!CL:0000307;4.76e-08;3!CL:0002159;6.10e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.71e-16,253;CL:0000223,4.79e-15,58;CL:0002202,5.35e-13,9;CL:0002632,5.35e-13,9;CL:0002076,1.80e-11,42;CL:0002328,1.15e-08,3;CL:0002368,1.16e-08,13;CL:0002159,6.41e-08,14;CL:0000068,6.42e-08,3;CL:0000069,6.42e-08,3;CL:0000307,6.42e-08,3;CL:0000377,6.42e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;3.01e-10;58!CL:0000377;4.76e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.40e-21!106;DOID:0050687!1.08e-15!143;DOID:162!6.11e-11!235;DOID:14566!3.32e-10!239;DOID:1749!3.11e-08!14 | |ontology_enrichment_disease=DOID:305!1.40e-21!106;DOID:0050687!1.08e-15!143;DOID:162!6.11e-11!235;DOID:14566!3.32e-10!239;DOID:1749!3.11e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.31e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.35e-07,106;DOID:3493,7.43e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.20e-25!169;UBERON:0000925!9.20e-25!169;UBERON:0006595!9.20e-25!169;UBERON:0001007!2.04e-23!155;UBERON:0001555!2.04e-23!155;UBERON:0007026!2.04e-23!155;UBERON:0004921!1.54e-22!129;UBERON:0004185!1.54e-22!129;UBERON:0000077!3.66e-18!130;UBERON:0001041!8.83e-16!98;UBERON:0001004!3.27e-13!72;UBERON:0000065!5.27e-12!53;UBERON:0008947!2.47e-11!38;UBERON:0003258!2.47e-11!38;UBERON:0000072!7.50e-10!46;UBERON:0005911!8.68e-10!82;UBERON:0005177!1.58e-08!107;UBERON:0000160!2.11e-08!27;UBERON:0005409!2.50e-08!35;UBERON:0001048!3.28e-08!168;UBERON:0000466!7.31e-08!126;UBERON:0003104!1.04e-07!238;UBERON:0009142!1.04e-07!238;UBERON:0000063!1.40e-07!97;UBERON:0005153!1.57e-07!37;UBERON:0000062!2.69e-07!511;UBERON:0005178!6.96e-07!34;UBERON:0002224!6.96e-07!34;UBERON:0005157!7.28e-07!51;UBERON:0001737!9.52e-07!9 | |ontology_enrichment_uberon=UBERON:0004119!9.20e-25!169;UBERON:0000925!9.20e-25!169;UBERON:0006595!9.20e-25!169;UBERON:0001007!2.04e-23!155;UBERON:0001555!2.04e-23!155;UBERON:0007026!2.04e-23!155;UBERON:0004921!1.54e-22!129;UBERON:0004185!1.54e-22!129;UBERON:0000077!3.66e-18!130;UBERON:0001041!8.83e-16!98;UBERON:0001004!3.27e-13!72;UBERON:0000065!5.27e-12!53;UBERON:0008947!2.47e-11!38;UBERON:0003258!2.47e-11!38;UBERON:0000072!7.50e-10!46;UBERON:0005911!8.68e-10!82;UBERON:0005177!1.58e-08!107;UBERON:0000160!2.11e-08!27;UBERON:0005409!2.50e-08!35;UBERON:0001048!3.28e-08!168;UBERON:0000466!7.31e-08!126;UBERON:0003104!1.04e-07!238;UBERON:0009142!1.04e-07!238;UBERON:0000063!1.40e-07!97;UBERON:0005153!1.57e-07!37;UBERON:0000062!2.69e-07!511;UBERON:0005178!6.96e-07!34;UBERON:0002224!6.96e-07!34;UBERON:0005157!7.28e-07!51;UBERON:0001737!9.52e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.62e-17;22!UBERON:0004921;3.19e-16;33!UBERON:0000160;2.27e-13;17!UBERON:0001007;2.97e-09;81!UBERON:0002365;8.39e-09;31!UBERON:0002330;8.39e-09;31!UBERON:0004815;1.02e-08;3!UBERON:0002031;1.02e-08;3!UBERON:0000059;2.35e-08;11!UBERON:0002423;2.89e-08;25!UBERON:0005178;1.44e-07;34!UBERON:0002224;1.44e-07;34!UBERON:0007196;1.81e-07;15!UBERON:0001558;1.81e-07;15!UBERON:0005181;2.57e-07;35!UBERON:0001555;7.14e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.24e-19,118;UBERON:0001007,1.02e-18,145;UBERON:0001555,1.02e-18,145;UBERON:0007026,1.02e-18,145;UBERON:0004119,4.33e-17,160;UBERON:0000925,4.33e-17,160;UBERON:0006595,4.33e-17,160;UBERON:0005409,6.85e-15,25;UBERON:0000160,2.33e-13,17;UBERON:0001041,9.95e-13,87;UBERON:0005911,2.48e-09,82;UBERON:0002365,1.14e-08,31;UBERON:0002330,1.14e-08,31;UBERON:0004815,1.15e-08,3;UBERON:0002031,1.15e-08,3;UBERON:0000059,2.44e-08,11;UBERON:0009497,3.36e-08,25;UBERON:0000015,3.36e-08,25;UBERON:0002423,3.36e-08,25;UBERON:0006235,3.36e-08,25;UBERON:0004161,3.36e-08,25;UBERON:0005178,4.14e-08,34;UBERON:0002224,4.14e-08,34;UBERON:0005181,8.36e-08,35;UBERON:0011216,1.22e-07,223;UBERON:0009856,1.33e-07,26;UBERON:0005157,1.68e-07,47;UBERON:0005153,2.14e-07,37;UBERON:0007196,2.31e-07,15;UBERON:0001558,2.31e-07,15;UBERON:0009854,3.86e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,11.0330546937471,2.409647350226,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,1.54608682530637,0.545492241181669,0.573609190778008,0.243947412259191,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,5.89696330006576,2.36315962672562,0,5.04252598026766,0,3.84125998930189,1.1240175325762,3.01586917234893,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,1.34337784054272,3.48760726216754,5.75074018747817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0.802025881213139,1.28913384510255,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,1.01950509218015,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.893288987462089,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02066436723575,1.34060455107157,2.17781969722645,0,0,0,3.54744122829341,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0.879049075631364,0,0,0,9.07229042003222,0,17.8153207217555,0,0,0,0.16480387422676,0.211125408127993,0.996239941255349,1.10513566212459,2.51932747854276,0,0,0,0.539210106883961,11.457355179239,0,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0.724999575434793,2.73104275885199,2.03402920234213,6.85524277127015,0,0,0,0,0,1.52581736317083,0,0.295547618953547,0,0.10893846351899,6.27406849253715,0.230850775511391,0,0,0.359030577639089,0.217294743844016,1.27600463892768,0,0,0,0,0.166211681900156,0.676786981851542,0.19606253431774,0.167821586975843,0.569261198172555,0.158936578980379,0.632994193584081,0.163232808159148,0.282706142867882,0,16.9194528283346,6.81123246675712,10.9985426088053,0,0,0,0,0,0,0,0.391329237864179,1.69946265673865,0,2.41981432097328,0,0.063186579628488,0,0,0.664653872707185,0,0.627865836814451,0,0.284609546029793,0.138674673013139,0,4.11568069140386,0.435296032902013,0.17472666824203,0,0.677294319023596,0.292357268344742,0.903270027585302,1.06687918137261,0,0.225980740780532,0,0,0,1.36885967914362,0.721429382263803,12.3802736948824,0,3.16998917739033,0,0.343189995723929,0.14405479798815,0,3.29971648463514,0.135904206073614,0,1.01998217636322,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,1.02418136999391,0.659326867049332,1.3480708770837,0.196854963029498,0,0,0,0,0,0,0.899895566206002,2.32140586367385,0,6.03782437678679,0.0788057072991982,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.339936274560377,1.17241786942466,0,0,0,3.25064991980226,0.704815022316672,0.427149650270779,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,3.76929831000562,0,0,0,0,0,0.248385611765534,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0.906823702049089,0.463044948647668,0,0,2.77921302444875,0.438568099157414,0,0,0.337884881306145,0,0.345430341731199,1.21543982470953,0,0,0,0,0,0,1.69049698686902,0.19998739585493,0,0,0,0,1.39879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0,3.4851433719119,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.523813388962845,0.163771917510097,5.32281910381363,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0,0.827356886187777,0,0.235479278551542,0,3.36326595976547,2.73947616152849,0,0.47775168788705,0.0714765441766563,0,1.51113852978563,0,0,1.03608082081518,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,5.39826284883836,17.6780991224291,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0.109940516745429,0.150962843566674,7.56306749457858,0.655678681511872,1.41095188908457,0.490296643507811,2.35676547101626,0,0,0,0,0,0,0,2.49975514047921,0.352894871715692,1.92579280054004,4.3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| ||
|short_description=p@chr17:27504928..27504983,- | |short_description=p@chr17:27504928..27504983,- | ||
}} | }} |
Latest revision as of 15:08, 25 July 2015
Short description: | p@chr17:27504928..27504983, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27504928..27504983, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.71e-16 | 253 |
endodermal cell | 4.79e-15 | 58 |
epithelial cell of tracheobronchial tree | 5.35e-13 | 9 |
epithelial cell of lower respiratory tract | 5.35e-13 | 9 |
endo-epithelial cell | 1.80e-11 | 42 |
bronchial epithelial cell | 1.15e-08 | 3 |
respiratory epithelial cell | 1.16e-08 | 13 |
general ecto-epithelial cell | 6.41e-08 | 14 |
duct epithelial cell | 6.42e-08 | 3 |
branched duct epithelial cell | 6.42e-08 | 3 |
tracheal epithelial cell | 6.42e-08 | 3 |
tracheoblast | 6.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.24e-19 | 118 |
digestive system | 1.02e-18 | 145 |
digestive tract | 1.02e-18 | 145 |
primitive gut | 1.02e-18 | 145 |
endoderm-derived structure | 4.33e-17 | 160 |
endoderm | 4.33e-17 | 160 |
presumptive endoderm | 4.33e-17 | 160 |
gastrointestinal system | 6.85e-15 | 25 |
intestine | 2.33e-13 | 17 |
foregut | 9.95e-13 | 87 |
endo-epithelium | 2.48e-09 | 82 |
exocrine gland | 1.14e-08 | 31 |
exocrine system | 1.14e-08 | 31 |
lower respiratory tract epithelium | 1.15e-08 | 3 |
epithelium of bronchus | 1.15e-08 | 3 |
large intestine | 2.44e-08 | 11 |
epithelium of foregut-midgut junction | 3.36e-08 | 25 |
anatomical boundary | 3.36e-08 | 25 |
hepatobiliary system | 3.36e-08 | 25 |
foregut-midgut junction | 3.36e-08 | 25 |
septum transversum | 3.36e-08 | 25 |
thoracic cavity element | 4.14e-08 | 34 |
thoracic cavity | 4.14e-08 | 34 |
thoracic segment organ | 8.36e-08 | 35 |
organ system subdivision | 1.22e-07 | 223 |
sac | 1.33e-07 | 26 |
epithelial fold | 1.68e-07 | 47 |
epithelial bud | 2.14e-07 | 37 |
tracheobronchial tree | 2.31e-07 | 15 |
lower respiratory tract | 2.31e-07 | 15 |
digestive tract diverticulum | 3.86e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.35e-07 | 106 |
signet ring cell adenocarcinoma | 7.43e-07 | 2 |