FFCP PHASE1:Hg19::chr17:38297024..38297041,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38297024..38297041,-
|short_description=p@chr17:38297024..38297041,-
|description=CAGE_peak_at_chr17:38297024..38297041,-
|association_with_transcript=NA
...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38297024..38297041,- | |||
|coexpression_cluster_id=C443 | |||
|description=CAGE_peak_at_chr17:38297024..38297041,- | |||
|id=chr17:38297024..38297041,- | |||
|ontology_enrichment_celltype=CL:0000738!6.09e-17!140;CL:0000838!2.99e-15!52;CL:0000037!3.42e-15!172;CL:0000566!3.42e-15!172;CL:0000542!6.10e-15!53;CL:0000051!6.10e-15!53;CL:0000988!4.65e-14!182;CL:0002087!1.20e-12!119;CL:0002032!1.61e-12!165;CL:0000837!1.61e-12!165;CL:0002031!2.44e-12!124;CL:0000791!6.32e-11!18;CL:0000789!6.32e-11!18;CL:0002420!6.32e-11!18;CL:0002419!6.32e-11!18;CL:0000790!6.32e-11!18;CL:0000084!7.35e-08!25;CL:0000827!7.35e-08!25;CL:0000625!3.93e-07!11;CL:0000945!5.07e-07!24;CL:0000826!5.07e-07!24;CL:0000236!9.24e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.84e-15;18!CL:0000789;8.84e-15;18!CL:0002419;8.84e-15;18!CL:0000625;1.42e-09;11!CL:0000084;4.79e-09;25!CL:0000542;6.31e-09;53!CL:0000236;9.56e-09;13!CL:0000624;3.43e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.56e-21,136;CL:0000037,1.84e-16,168;CL:0000838,6.27e-16,52;CL:0000988,1.52e-15,177;CL:0000542,2.10e-15,53;CL:0000051,2.10e-15,53;CL:0000791,6.32e-15,18;CL:0000789,6.32e-15,18;CL:0002420,6.32e-15,18;CL:0002419,6.32e-15,18;CL:0000790,6.32e-15,18;CL:0002031,9.96e-14,120;CL:0002087,1.51e-13,115;CL:0002032,1.07e-12,161;CL:0000837,1.07e-12,161;CL:0000625,9.16e-10,11;CL:0000084,3.81e-09,25;CL:0000827,3.81e-09,25;CL:0000236,3.72e-08,14;CL:0000624,3.89e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-15;18!CL:0000051;6.31e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.46e-07!15;UBERON:0000179!2.46e-07!15;UBERON:0000463!2.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.42e-11;15!UBERON:0000179;2.42e-11;15!UBERON:0000463;2.42e-11;15!UBERON:0002390;3.59e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.67e-11,15;UBERON:0000179,3.67e-11,15;UBERON:0000463,3.67e-11,15;UBERON:0002390,1.89e-08,98;UBERON:0003061,1.89e-08,98;UBERON:0002193,3.67e-08,108 | |||
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| ||
|short_description=p@chr17:38297024..38297041,- | |||
}} | }} |
Latest revision as of 16:20, 25 July 2015
Short description: | p@chr17:38297024..38297041, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38297024..38297041, - |
Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.56e-21 | 136 |
hematopoietic stem cell | 1.84e-16 | 168 |
lymphoid lineage restricted progenitor cell | 6.27e-16 | 52 |
hematopoietic cell | 1.52e-15 | 177 |
lymphocyte | 2.10e-15 | 53 |
common lymphoid progenitor | 2.10e-15 | 53 |
mature alpha-beta T cell | 6.32e-15 | 18 |
alpha-beta T cell | 6.32e-15 | 18 |
immature T cell | 6.32e-15 | 18 |
mature T cell | 6.32e-15 | 18 |
immature alpha-beta T cell | 6.32e-15 | 18 |
hematopoietic lineage restricted progenitor cell | 9.96e-14 | 120 |
nongranular leukocyte | 1.51e-13 | 115 |
hematopoietic oligopotent progenitor cell | 1.07e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-12 | 161 |
CD8-positive, alpha-beta T cell | 9.16e-10 | 11 |
T cell | 3.81e-09 | 25 |
pro-T cell | 3.81e-09 | 25 |
B cell | 3.72e-08 | 14 |
CD4-positive, alpha-beta T cell | 3.89e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 3.67e-11 | 15 |
haemolymphatic fluid | 3.67e-11 | 15 |
organism substance | 3.67e-11 | 15 |
hematopoietic system | 1.89e-08 | 98 |
blood island | 1.89e-08 | 98 |
hemolymphoid system | 3.67e-08 | 108 |