FFCP PHASE1:Hg19::chr17:39659966..39659969,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39659966..39659969,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr17:39659966..39659969,- | |description=CAGE_peak_at_chr17:39659966..39659969,- | ||
|id=chr17:39659966..39659969,- | |id=chr17:39659966..39659969,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.34e-66;1!UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.29e-23!3;UBERON:0001033!3.29e-23!3;UBERON:0010056!3.29e-23!3;UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0001042!1.65e-15!10;UBERON:0009145!1.65e-15!10;UBERON:0006562!3.69e-14!11;UBERON:0000002!5.37e-12!6;UBERON:0001560!5.37e-12!6;UBERON:0000341!7.98e-10!2;UBERON:0001255!1.86e-09!2;UBERON:0001556!1.86e-09!2;UBERON:0000078!6.87e-09!18;UBERON:0001557!1.89e-08!19;UBERON:0000161!7.73e-08!35;UBERON:0000166!1.07e-07!21;UBERON:0005795!2.16e-07!22;UBERON:0000020!4.13e-07!23;UBERON:0001032!7.77e-07!24;UBERON:0004456!7.77e-07!24;UBERON:0002240!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0001723!3.29e-23!3;UBERON:0001033!3.29e-23!3;UBERON:0010056!3.29e-23!3;UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0001042!1.65e-15!10;UBERON:0009145!1.65e-15!10;UBERON:0006562!3.69e-14!11;UBERON:0000002!5.37e-12!6;UBERON:0001560!5.37e-12!6;UBERON:0000341!7.98e-10!2;UBERON:0001255!1.86e-09!2;UBERON:0001556!1.86e-09!2;UBERON:0000078!6.87e-09!18;UBERON:0001557!1.89e-08!19;UBERON:0000161!7.73e-08!35;UBERON:0000166!1.07e-07!21;UBERON:0005795!2.16e-07!22;UBERON:0000020!4.13e-07!23;UBERON:0001032!7.77e-07!24;UBERON:0004456!7.77e-07!24;UBERON:0002240!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.61e-34;2!UBERON:0001043;3.66e-23;3!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0000974;2.19e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.61e-34,2;UBERON:0001043,3.27e-23,3;UBERON:0009143,3.27e-23,3;UBERON:0001723,4.09e-23,3;UBERON:0001033,4.09e-23,3;UBERON:0010056,4.09e-23,3;UBERON:0000974,5.73e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11 | |||
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|short_description=p@chr17:39659966..39659969,- | |short_description=p@chr17:39659966..39659969,- | ||
}} | }} | ||
Latest revision as of 16:41, 25 July 2015
| Short description: | p@chr17:39659966..39659969, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr17:39659966..39659969, - |
| Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| throat | 3.61e-34 | 2 |
| esophagus | 3.27e-23 | 3 |
| esophageal region | 3.27e-23 | 3 |
| tongue | 4.09e-23 | 3 |
| gustatory system | 4.09e-23 | 3 |
| future tongue | 4.09e-23 | 3 |
| neck | 5.73e-08 | 10 |
| chordate pharynx | 6.56e-08 | 10 |
| pharyngeal region of foregut | 6.56e-08 | 10 |
| pharynx | 2.63e-07 | 11 |