FFCP PHASE1:Hg19::chr17:4872340..4872347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4872340..4872347,- | |||
|coexpression_cluster_id=C2420 | |||
|description=CAGE_peak_at_chr17:4872340..4872347,- | |description=CAGE_peak_at_chr17:4872340..4872347,- | ||
|id=chr17:4872340..4872347,- | |id=chr17:4872340..4872347,- | ||
|ontology_enrichment_celltype=CL:0000055!9.83e-19!180;CL:0000057!1.16e-13!75;CL:0002334!4.70e-10!12;CL:0000548!4.75e-09!679;CL:0000004!4.75e-09!679;CL:0000255!4.75e-09!679;CL:0000012!8.57e-09!682;CL:0002371!5.82e-08!591;CL:0002620!4.06e-07!23;CL:0000144!4.59e-07!625 | |ontology_enrichment_celltype=CL:0000055!9.83e-19!180;CL:0000057!1.16e-13!75;CL:0002334!4.70e-10!12;CL:0000548!4.75e-09!679;CL:0000004!4.75e-09!679;CL:0000255!4.75e-09!679;CL:0000012!8.57e-09!682;CL:0002371!5.82e-08!591;CL:0002620!4.06e-07!23;CL:0000144!4.59e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:1000306;8.33e-09;4!CL:0002547;8.33e-09;4!CL:0000062;1.80e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.84e-11,11;CL:0000375,1.84e-11,11;CL:0000335,1.84e-11,11;CL:1000306,7.01e-09,4;CL:0002547,7.01e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000335;1.28e-11;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.60e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.12e-07!83;UBERON:0002329!4.12e-07!83;UBERON:0003077!4.12e-07!83;UBERON:0003059!4.12e-07!83;UBERON:0007282!4.12e-07!83;UBERON:0009618!4.12e-07!83;UBERON:0007285!4.12e-07!83 | |ontology_enrichment_uberon=UBERON:0000914!4.12e-07!83;UBERON:0002329!4.12e-07!83;UBERON:0003077!4.12e-07!83;UBERON:0003059!4.12e-07!83;UBERON:0007282!4.12e-07!83;UBERON:0009618!4.12e-07!83;UBERON:0007285!4.12e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;8.33e-09;4!UBERON:0000415;8.33e-09;4!UBERON:0007240;8.33e-09;4!UBERON:0005742;8.33e-09;4!UBERON:0005734;8.33e-09;4!UBERON:0004664;8.33e-09;4!UBERON:0004663;8.33e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.01e-09,4;UBERON:0007240,7.01e-09,4;UBERON:0005742,7.01e-09,4;UBERON:0005734,7.01e-09,4;UBERON:0004664,7.01e-09,4;UBERON:0004663,7.01e-09,4 | |||
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| ||
|short_description=p@chr17:4872340..4872347,- | |short_description=p@chr17:4872340..4872347,- | ||
}} | }} |
Latest revision as of 18:47, 25 July 2015
Short description: | p@chr17:4872340..4872347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4872340..4872347, - |
Coexpression cluster: | C2420_Smooth_osteosarcoma_Fibroblast_Preadipocyte_mesenchymal_thyroid_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.84e-11 | 11 |
osteoprogenitor cell | 1.84e-11 | 11 |
mesenchyme condensation cell | 1.84e-11 | 11 |
fibroblast of tunica adventitia of artery | 7.01e-09 | 4 |
fibroblast of the aortic adventitia | 7.01e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.01e-09 | 4 |
tunica adventitia of artery | 7.01e-09 | 4 |
adventitia | 7.01e-09 | 4 |
tunica adventitia of blood vessel | 7.01e-09 | 4 |
aorta tunica adventitia | 7.01e-09 | 4 |
aorta wall | 7.01e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.60e-09 | 1 |