FFCP PHASE1:Hg19::chr17:48749093..48749095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48749093..48749095,+ | |||
|description=CAGE_peak_at_chr17:48749093..48749095,+ | |description=CAGE_peak_at_chr17:48749093..48749095,+ | ||
|id=chr17:48749093..48749095,+ | |id=chr17:48749093..48749095,+ | ||
|ontology_enrichment_celltype=CL:0000223!6.74e-09!59;CL:0000066!8.24e-09!254 | |ontology_enrichment_celltype=CL:0000223!6.74e-09!59;CL:0000066!8.24e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.39e-15;12!CL:0000319;5.92e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-15,12;CL:0000319,5.28e-09,1;CL:0000223,3.47e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.07e-09;13 | |||
|ontology_enrichment_disease=DOID:305!1.26e-19!106;DOID:0050687!3.43e-14!143;DOID:162!7.47e-08!235;DOID:14566!2.75e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.92e-09;1!DOID:5662;1.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.28e-09,1;DOID:5662,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.19e-16!155;UBERON:0001555!1.19e-16!155;UBERON:0007026!1.19e-16!155;UBERON:0004921!1.27e-16!129;UBERON:0004185!1.27e-16!129;UBERON:0004119!5.97e-16!169;UBERON:0000925!5.97e-16!169;UBERON:0006595!5.97e-16!169;UBERON:0000077!4.60e-12!130;UBERON:0005409!2.46e-11!35;UBERON:0001041!1.08e-09!98;UBERON:0000062!5.61e-09!511;UBERON:0000160!6.67e-09!27;UBERON:0005177!3.93e-07!107;UBERON:0005911!6.04e-07!82;UBERON:0002294!6.61e-07!7;UBERON:0001173!6.61e-07!7;UBERON:0004912!6.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;5.55e-14;25!UBERON:0002107;1.01e-13;19!UBERON:0006925;1.01e-13;19!UBERON:0005409;3.53e-11;22!UBERON:0000160;2.96e-10;17!UBERON:0002365;2.89e-08;31!UBERON:0002330;2.89e-08;31!UBERON:0002368;5.17e-08;33!UBERON:0004921;4.67e-07;33!UBERON:0002108;7.48e-07;4!UBERON:0000949;9.74e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,4.57e-16,22;UBERON:0003894,4.57e-16,22;UBERON:0009854,2.47e-15,23;UBERON:0007499,4.83e-14,25;UBERON:0009497,4.83e-14,25;UBERON:0000015,4.83e-14,25;UBERON:0002423,4.83e-14,25;UBERON:0006235,4.83e-14,25;UBERON:0004161,4.83e-14,25;UBERON:0002107,8.51e-14,19;UBERON:0006925,8.51e-14,19;UBERON:0008836,8.51e-14,19;UBERON:0009856,1.80e-13,26;UBERON:0004921,2.72e-11,118;UBERON:0000160,3.34e-10,17;UBERON:0005409,8.33e-10,25;UBERON:0000949,1.27e-09,45;UBERON:0001007,1.10e-08,145;UBERON:0001555,1.10e-08,145;UBERON:0007026,1.10e-08,145;UBERON:0002365,2.94e-08,31;UBERON:0002330,2.94e-08,31;UBERON:0004119,1.29e-07,160;UBERON:0000925,1.29e-07,160;UBERON:0006595,1.29e-07,160;UBERON:0002368,2.97e-07,35;UBERON:0011216,3.12e-07,223;UBERON:0001041,5.64e-07,87;UBERON:0002108,9.45e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.502170558379211,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0.581592955118259,0,0,0,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0.580418477257168,0,0.622822248995575,0.502497330513487,0.521482918420201,0,1.21079900526674,0,0,0,0,0,0,0,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0.649094787309367,0.870648686496336,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675105328965065,0.0974370051611986,0.757301322732344,0.0920498986422993,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.337169380156203,0.241011029883482,0.55146986366197,0.435758888184812,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,1.26755034821831,7.86261773342101,5.31710916013264,0,0.368965315629341,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.831883446123229,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0.384380134730212,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0,0,0,0.192444225451024,0,1.08890984861323,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0.996239941255349,0.552567831062295,0,0.818149460017238,0,0,0.449341755736634,7.33986816169998,0,0.394573622547734,0,0,0,0,0,0,0,0,1.0241410345695,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.221158519862449,0,0,0.32681539055697,0,0,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,2.98578579323551,0.265372693510018,1.22206028986725,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0.330991955875499,0.313932918407225,0,2.27687636823834,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.292357268344742,0.410577285266046,0,0,0,0.137041924646751,0,0,0.391102765469606,0.320635281006135,0.213452994739353,0.19980960958213,0.432271251462318,0,0,0.14405479798815,0.49701014226173,2.12124631155116,0,0.104602846312333,1.83596791745379,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,2.55911451938347,0,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0.315222829196793,0.209818352539992,0,0.537862017998534,0.575745591958336,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0.339936274560377,0,1.32506888912221,0,0.13223260174269,3.76391043345525,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0.385239660814607,0.428883182749851,0,0,0,0.734210113519403,0.179088841081487,0,0.438568099157414,0,0,0.844712203265363,1.28120759293973,0,0.303859956177382,0,0,0.132864840313363,0,0.327609848846413,2.45772908753719,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0,0,0,0.707818340086442,0.183428598521679,0.115525666150338,0,0,0,0,0,2.34454203369928,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,1.54339208493677,0,0,0.354581522651905,0.889851215136553,0,0,0.280272163313789,4.56579360254748,0.431855182437243,0.47775168788705,0.0714765441766563,0,0,0,0,0.828864656652147,0,0,0,0,0,0.423387050190929,0.68732060563215,0,0.955538938977433,0,0.687051635306701,1.82876887473404,0,0,0,0,0,0,0,0.22589216407792,0,0,2.16087642702245,0.655678681511872,0,0,0.235676547101626,0.392616934229891,1.78227840196252,0,0,0.0939839179798536,0.128915775947154,0,0.178553938605658,0,0.561689566824178,1.46067277649303,0,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.06207471429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| ||
|short_description=p@chr17:48749093..48749095,+ | |short_description=p@chr17:48749093..48749095,+ | ||
}} | }} |
Latest revision as of 18:47, 25 July 2015
Short description: | p@chr17:48749093..48749095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48749093..48749095, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-15 | 12 |
mucus secreting cell | 5.28e-09 | 1 |
endodermal cell | 3.47e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 4.57e-16 | 22 |
liver primordium | 4.57e-16 | 22 |
digestive tract diverticulum | 2.47e-15 | 23 |
epithelial sac | 4.83e-14 | 25 |
epithelium of foregut-midgut junction | 4.83e-14 | 25 |
anatomical boundary | 4.83e-14 | 25 |
hepatobiliary system | 4.83e-14 | 25 |
foregut-midgut junction | 4.83e-14 | 25 |
septum transversum | 4.83e-14 | 25 |
liver | 8.51e-14 | 19 |
digestive gland | 8.51e-14 | 19 |
liver bud | 8.51e-14 | 19 |
sac | 1.80e-13 | 26 |
subdivision of digestive tract | 2.72e-11 | 118 |
intestine | 3.34e-10 | 17 |
gastrointestinal system | 8.33e-10 | 25 |
endocrine system | 1.27e-09 | 45 |
digestive system | 1.10e-08 | 145 |
digestive tract | 1.10e-08 | 145 |
primitive gut | 1.10e-08 | 145 |
exocrine gland | 2.94e-08 | 31 |
exocrine system | 2.94e-08 | 31 |
endoderm-derived structure | 1.29e-07 | 160 |
endoderm | 1.29e-07 | 160 |
presumptive endoderm | 1.29e-07 | 160 |
endocrine gland | 2.97e-07 | 35 |
organ system subdivision | 3.12e-07 | 223 |
foregut | 5.64e-07 | 87 |
small intestine | 9.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.28e-09 | 1 |
pleomorphic carcinoma | 1.05e-08 | 1 |