FFCP PHASE1:Hg19::chr17:53398728..53398764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:53398728..53398764,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr17:53398728..53398764,+ | |description=CAGE_peak_at_chr17:53398728..53398764,+ | ||
|id=chr17:53398728..53398764,+ | |id=chr17:53398728..53398764,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002771;3.61e-34;2!UBERON:0002360;5.96e-34;2!UBERON:0000094;5.96e-34;2!UBERON:0010743;5.96e-34;2!UBERON:0000200;2.19e-12;6!UBERON:0001871;8.16e-11;6!UBERON:0000305;9.43e-11;7!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.61e-34,2;UBERON:0002360,5.04e-34,2;UBERON:0000094,5.04e-34,2;UBERON:0010743,5.04e-34,2;UBERON:0000200,2.19e-12,6;UBERON:0001871,8.16e-11,6;UBERON:0000305,9.89e-11,7;UBERON:0004871,1.47e-09,8 | |||
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| ||
|short_description=p@chr17:53398728..53398764,+ | |short_description=p@chr17:53398728..53398764,+ | ||
}} | }} |
Latest revision as of 19:01, 25 July 2015
Short description: | p@chr17:53398728..53398764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:53398728..53398764, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.61e-34 | 2 |
meninx | 5.04e-34 | 2 |
membrane organ | 5.04e-34 | 2 |
meningeal cluster | 5.04e-34 | 2 |
gyrus | 2.19e-12 | 6 |
temporal lobe | 8.16e-11 | 6 |
amnion | 9.89e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |