FFCP PHASE1:Hg19::chr17:53398728..53398764,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:53398728..53398764,+
|short_description=p@chr17:53398728..53398764,+
|description=CAGE_peak_at_chr17:53398728..53398764,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:53398728..53398764,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr17:53398728..53398764,+ | |||
|id=chr17:53398728..53398764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.72e-44!115;UBERON:0001049!6.12e-37!57;UBERON:0005068!6.12e-37!57;UBERON:0006241!6.12e-37!57;UBERON:0007135!6.12e-37!57;UBERON:0002020!4.59e-35!34;UBERON:0003528!4.59e-35!34;UBERON:0002619!1.96e-33!22;UBERON:0002616!6.95e-33!59;UBERON:0001893!6.51e-32!34;UBERON:0003075!1.89e-31!86;UBERON:0007284!1.89e-31!86;UBERON:0002780!2.94e-31!41;UBERON:0001890!2.94e-31!41;UBERON:0006240!2.94e-31!41;UBERON:0001869!5.81e-31!32;UBERON:0003080!2.21e-30!42;UBERON:0002791!6.57e-30!33;UBERON:0002346!1.19e-29!90;UBERON:0005743!4.72e-29!86;UBERON:0000956!4.85e-29!25;UBERON:0000203!4.85e-29!25;UBERON:0001017!7.05e-29!82;UBERON:0001950!2.73e-28!20;UBERON:0000955!1.49e-26!69;UBERON:0006238!1.49e-26!69;UBERON:0000073!1.66e-25!94;UBERON:0001016!1.66e-25!94;UBERON:0003056!5.47e-21!61;UBERON:0000033!3.27e-19!123;UBERON:0004121!5.69e-18!169;UBERON:0000153!6.48e-18!129;UBERON:0007811!6.48e-18!129;UBERON:0000924!2.52e-17!173;UBERON:0006601!2.52e-17!173;UBERON:0000025!1.93e-13!194;UBERON:0001871!2.56e-13!7;UBERON:0000200!3.16e-12!6;UBERON:0004111!4.23e-12!241;UBERON:0002298!2.74e-11!8;UBERON:0002771!2.78e-10!3;UBERON:0000349!4.28e-10!5;UBERON:0000477!5.90e-10!286;UBERON:0001872!1.86e-09!5;UBERON:0000475!5.28e-09!365;UBERON:0006331!1.24e-08!3;UBERON:0000988!1.72e-08!3;UBERON:0000483!2.21e-08!309;UBERON:0000119!3.34e-08!312;UBERON:0002420!4.97e-08!9;UBERON:0007245!4.97e-08!9;UBERON:0010009!4.97e-08!9;UBERON:0010011!4.97e-08!9;UBERON:0000454!4.97e-08!9;UBERON:0003076!7.26e-08!15;UBERON:0003057!7.26e-08!15;UBERON:0002308!1.17e-07!9;UBERON:0000125!1.17e-07!9;UBERON:0000481!1.52e-07!347;UBERON:0004733!1.87e-07!12;UBERON:0002028!1.87e-07!12;UBERON:0007277!1.87e-07!12;UBERON:0001954!2.54e-07!2;UBERON:0003022!2.54e-07!2;UBERON:0002421!2.54e-07!2;UBERON:0002600!2.54e-07!2;UBERON:0000064!2.85e-07!219;UBERON:0001829!2.87e-07!2;UBERON:0001876!5.73e-07!2;UBERON:0004732!7.81e-07!13;UBERON:0002360!7.92e-07!2;UBERON:0000094!7.92e-07!2;UBERON:0007645!7.92e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;3.61e-34;2!UBERON:0002360;5.96e-34;2!UBERON:0000094;5.96e-34;2!UBERON:0010743;5.96e-34;2!UBERON:0000200;2.19e-12;6!UBERON:0001871;8.16e-11;6!UBERON:0000305;9.43e-11;7!UBERON:0005631;6.34e-08;10!UBERON:0000158;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.61e-34,2;UBERON:0002360,5.04e-34,2;UBERON:0000094,5.04e-34,2;UBERON:0010743,5.04e-34,2;UBERON:0000200,2.19e-12,6;UBERON:0001871,8.16e-11,6;UBERON:0000305,9.89e-11,7;UBERON:0004871,1.47e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.551482276150566,0.329663433524666,0.337017719270924,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78281421196086,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.82046545696302,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.0634158101939068,0.546974809018219,0.548257766857182,0.992422356778588,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.551482276150566,0.329663433524666,0.337017719270924,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78281421196086,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0.82046545696302,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.826747186004736,0.0634158101939068,0.546974809018219,0.548257766857182,0.992422356778588,0,0,0,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr17:53398728..53398764,+ | |||
}} | }} |
Latest revision as of 19:01, 25 July 2015
Short description: | p@chr17:53398728..53398764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:53398728..53398764, + |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.61e-34 | 2 |
meninx | 5.04e-34 | 2 |
membrane organ | 5.04e-34 | 2 |
meningeal cluster | 5.04e-34 | 2 |
gyrus | 2.19e-12 | 6 |
temporal lobe | 8.16e-11 | 6 |
amnion | 9.89e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |