FFCP PHASE1:Hg19::chr17:65474624..65474629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:65474624..65474629,- | |||
|coexpression_cluster_id=C2292 | |coexpression_cluster_id=C2292 | ||
|description=CAGE_peak_at_chr17:65474624..65474629,- | |description=CAGE_peak_at_chr17:65474624..65474629,- | ||
|id=chr17:65474624..65474629,- | |id=chr17:65474624..65474629,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.21e-40;1!UBERON:0006238;2.02e-15;10!UBERON:0006601;1.54e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-49!82;UBERON:0001049!5.10e-48!57;UBERON:0005068!5.10e-48!57;UBERON:0006241!5.10e-48!57;UBERON:0007135!5.10e-48!57;UBERON:0005743!3.20e-47!86;UBERON:0000955!2.14e-46!69;UBERON:0006238!2.14e-46!69;UBERON:0000073!2.22e-42!94;UBERON:0001016!2.22e-42!94;UBERON:0002616!7.70e-42!59;UBERON:0003075!6.68e-37!86;UBERON:0007284!6.68e-37!86;UBERON:0002780!3.34e-35!41;UBERON:0001890!3.34e-35!41;UBERON:0006240!3.34e-35!41;UBERON:0002346!4.49e-35!90;UBERON:0003080!2.62e-34!42;UBERON:0001893!1.97e-32!34;UBERON:0007023!5.28e-32!115;UBERON:0001869!1.61e-29!32;UBERON:0002791!1.11e-28!33;UBERON:0001950!8.55e-28!20;UBERON:0002020!1.34e-27!34;UBERON:0003528!1.34e-27!34;UBERON:0000033!1.13e-26!123;UBERON:0002619!3.13e-25!22;UBERON:0000153!3.13e-25!129;UBERON:0007811!3.13e-25!129;UBERON:0003056!8.58e-23!61;UBERON:0000956!4.01e-22!25;UBERON:0000203!4.01e-22!25;UBERON:0004121!1.07e-21!169;UBERON:0000924!4.33e-21!173;UBERON:0006601!4.33e-21!173;UBERON:0000200!7.73e-17!6;UBERON:0003076!1.84e-14!15;UBERON:0003057!1.84e-14!15;UBERON:0002360!1.54e-13!2;UBERON:0000094!1.54e-13!2;UBERON:0007645!1.54e-13!2;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0002298!1.16e-12!8;UBERON:0001871!2.07e-12!7;UBERON:0004732!1.03e-11!13;UBERON:0000025!3.60e-11!194;UBERON:0001896!2.64e-09!3;UBERON:0005290!2.64e-09!3;UBERON:0010096!2.64e-09!3;UBERON:0000988!3.26e-09!3;UBERON:0002771!5.35e-09!3;UBERON:0004111!3.84e-08!241;UBERON:0002336!4.28e-08!1;UBERON:0001018!4.28e-08!1;UBERON:0002473!4.28e-08!1;UBERON:0005340!4.28e-08!1;UBERON:0002316!4.28e-08!1;UBERON:0003544!4.28e-08!1;UBERON:0001020!4.28e-08!1;UBERON:0005970!4.28e-08!1;UBERON:0002437!4.28e-08!1;UBERON:0001882!7.26e-08!1;UBERON:0005403!7.26e-08!1;UBERON:0007190!8.28e-08!1;UBERON:0002581!9.44e-08!1;UBERON:0003112!1.22e-07!1;UBERON:0000032!1.22e-07!1;UBERON:0005253!1.22e-07!1;UBERON:0003128!1.22e-07!1;UBERON:0002241!1.22e-07!1;UBERON:0001703!1.22e-07!1;UBERON:0004761!1.22e-07!1;UBERON:0009617!1.22e-07!1;UBERON:0002022!1.30e-07!1;UBERON:0000369!1.74e-07!4;UBERON:0002435!1.74e-07!4;UBERON:0000204!1.74e-07!4;UBERON:0010082!1.74e-07!4;UBERON:0002902!2.98e-07!1;UBERON:0009899!2.98e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0000477!5.37e-07!286;UBERON:0002308!5.70e-07!9;UBERON:0000125!5.70e-07!9;UBERON:0000483!6.23e-07!309;UBERON:0002420!6.31e-07!9;UBERON:0007245!6.31e-07!9;UBERON:0010009!6.31e-07!9;UBERON:0010011!6.31e-07!9;UBERON:0000454!6.31e-07!9;UBERON:0000119!8.06e-07!312 | |ontology_enrichment_uberon=UBERON:0001017!1.05e-49!82;UBERON:0001049!5.10e-48!57;UBERON:0005068!5.10e-48!57;UBERON:0006241!5.10e-48!57;UBERON:0007135!5.10e-48!57;UBERON:0005743!3.20e-47!86;UBERON:0000955!2.14e-46!69;UBERON:0006238!2.14e-46!69;UBERON:0000073!2.22e-42!94;UBERON:0001016!2.22e-42!94;UBERON:0002616!7.70e-42!59;UBERON:0003075!6.68e-37!86;UBERON:0007284!6.68e-37!86;UBERON:0002780!3.34e-35!41;UBERON:0001890!3.34e-35!41;UBERON:0006240!3.34e-35!41;UBERON:0002346!4.49e-35!90;UBERON:0003080!2.62e-34!42;UBERON:0001893!1.97e-32!34;UBERON:0007023!5.28e-32!115;UBERON:0001869!1.61e-29!32;UBERON:0002791!1.11e-28!33;UBERON:0001950!8.55e-28!20;UBERON:0002020!1.34e-27!34;UBERON:0003528!1.34e-27!34;UBERON:0000033!1.13e-26!123;UBERON:0002619!3.13e-25!22;UBERON:0000153!3.13e-25!129;UBERON:0007811!3.13e-25!129;UBERON:0003056!8.58e-23!61;UBERON:0000956!4.01e-22!25;UBERON:0000203!4.01e-22!25;UBERON:0004121!1.07e-21!169;UBERON:0000924!4.33e-21!173;UBERON:0006601!4.33e-21!173;UBERON:0000200!7.73e-17!6;UBERON:0003076!1.84e-14!15;UBERON:0003057!1.84e-14!15;UBERON:0002360!1.54e-13!2;UBERON:0000094!1.54e-13!2;UBERON:0007645!1.54e-13!2;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0002298!1.16e-12!8;UBERON:0001871!2.07e-12!7;UBERON:0004732!1.03e-11!13;UBERON:0000025!3.60e-11!194;UBERON:0001896!2.64e-09!3;UBERON:0005290!2.64e-09!3;UBERON:0010096!2.64e-09!3;UBERON:0000988!3.26e-09!3;UBERON:0002771!5.35e-09!3;UBERON:0004111!3.84e-08!241;UBERON:0002336!4.28e-08!1;UBERON:0001018!4.28e-08!1;UBERON:0002473!4.28e-08!1;UBERON:0005340!4.28e-08!1;UBERON:0002316!4.28e-08!1;UBERON:0003544!4.28e-08!1;UBERON:0001020!4.28e-08!1;UBERON:0005970!4.28e-08!1;UBERON:0002437!4.28e-08!1;UBERON:0001882!7.26e-08!1;UBERON:0005403!7.26e-08!1;UBERON:0007190!8.28e-08!1;UBERON:0002581!9.44e-08!1;UBERON:0003112!1.22e-07!1;UBERON:0000032!1.22e-07!1;UBERON:0005253!1.22e-07!1;UBERON:0003128!1.22e-07!1;UBERON:0002241!1.22e-07!1;UBERON:0001703!1.22e-07!1;UBERON:0004761!1.22e-07!1;UBERON:0009617!1.22e-07!1;UBERON:0002022!1.30e-07!1;UBERON:0000369!1.74e-07!4;UBERON:0002435!1.74e-07!4;UBERON:0000204!1.74e-07!4;UBERON:0010082!1.74e-07!4;UBERON:0002902!2.98e-07!1;UBERON:0009899!2.98e-07!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0000477!5.37e-07!286;UBERON:0002308!5.70e-07!9;UBERON:0000125!5.70e-07!9;UBERON:0000483!6.23e-07!309;UBERON:0002420!6.31e-07!9;UBERON:0007245!6.31e-07!9;UBERON:0010009!6.31e-07!9;UBERON:0010011!6.31e-07!9;UBERON:0000454!6.31e-07!9;UBERON:0000119!8.06e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;6.62e-41;1!UBERON:0011215;6.62e-41;1!UBERON:0001018;6.62e-41;1!UBERON:0002473;6.62e-41;1!UBERON:0005340;6.62e-41;1!UBERON:0003544;6.62e-41;1!UBERON:0005970;6.62e-41;1!UBERON:0002316;6.62e-41;1!UBERON:0001020;6.62e-41;1!UBERON:0002437;6.62e-41;1!UBERON:0005162;3.11e-21;2!UBERON:0000122;3.11e-21;2!UBERON:0002360;5.69e-21;2!UBERON:0000094;5.69e-21;2!UBERON:0010743;5.69e-21;2!UBERON:0001017;9.44e-10;75!UBERON:0000955;8.01e-08;68!UBERON:0001894;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,6.62e-41,1;UBERON:0011215,6.62e-41,1;UBERON:0001018,6.62e-41,1;UBERON:0002473,6.62e-41,1;UBERON:0005340,6.62e-41,1;UBERON:0003544,6.62e-41,1;UBERON:0005970,6.62e-41,1;UBERON:0002316,6.62e-41,1;UBERON:0001020,6.62e-41,1;UBERON:0002437,6.62e-41,1;UBERON:0005162,3.11e-21,2;UBERON:0000122,3.11e-21,2;UBERON:0002360,5.70e-21,2;UBERON:0000094,5.70e-21,2;UBERON:0010743,5.70e-21,2;UBERON:0001017,1.45e-12,81;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.66e-10,68;UBERON:0006238,9.66e-10,68;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
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|short_description=p@chr17:65474624..65474629,- | |short_description=p@chr17:65474624..65474629,- | ||
}} | }} |
Latest revision as of 20:06, 25 July 2015
Short description: | p@chr17:65474624..65474629, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:65474624..65474629, - |
Coexpression cluster: | C2292_corpus_brain_diencephalon_thalamus_parietal_cerebral_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 6.62e-41 | 1 |
central nervous system cell part cluster | 6.62e-41 | 1 |
axon tract | 6.62e-41 | 1 |
intercerebral commissure | 6.62e-41 | 1 |
dorsal telencephalic commissure | 6.62e-41 | 1 |
brain white matter | 6.62e-41 | 1 |
brain commissure | 6.62e-41 | 1 |
white matter | 6.62e-41 | 1 |
nervous system commissure | 6.62e-41 | 1 |
cerebral hemisphere white matter | 6.62e-41 | 1 |
multi cell component structure | 3.11e-21 | 2 |
neuron projection bundle | 3.11e-21 | 2 |
meninx | 5.70e-21 | 2 |
membrane organ | 5.70e-21 | 2 |
meningeal cluster | 5.70e-21 | 2 |
central nervous system | 1.45e-12 | 81 |
nervous system | 2.13e-11 | 89 |
brain | 9.66e-10 | 68 |
future brain | 9.66e-10 | 68 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |