FFCP PHASE1:Hg19::chr17:67957811..67957837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000455460_5end | |association_with_transcript=-10bp_to_ENST00000455460_5end | ||
|cluster_id=chr17:67957811..67957837,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_ENST00000455460_5end | |description=CAGE_peak_1_at_ENST00000455460_5end | ||
|id=chr17:67957811..67957837,+ | |id=chr17:67957811..67957837,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;3.76e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.76e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-34!115;UBERON:0001049!1.84e-25!57;UBERON:0005068!1.84e-25!57;UBERON:0006241!1.84e-25!57;UBERON:0007135!1.84e-25!57;UBERON:0002616!1.09e-20!59;UBERON:0003075!2.26e-20!86;UBERON:0007284!2.26e-20!86;UBERON:0002346!5.18e-19!90;UBERON:0001017!3.02e-17!82;UBERON:0005743!3.78e-17!86;UBERON:0003076!4.45e-17!15;UBERON:0003057!4.45e-17!15;UBERON:0000955!3.69e-16!69;UBERON:0006238!3.69e-16!69;UBERON:0004733!4.31e-15!12;UBERON:0002028!4.31e-15!12;UBERON:0007277!4.31e-15!12;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0004732!9.51e-14!13;UBERON:0002780!7.79e-13!41;UBERON:0001890!7.79e-13!41;UBERON:0006240!7.79e-13!41;UBERON:0003080!2.06e-12!42;UBERON:0000153!6.78e-11!129;UBERON:0007811!6.78e-11!129;UBERON:0002680!6.66e-10!9;UBERON:0001895!6.66e-10!9;UBERON:0010092!6.66e-10!9;UBERON:0000481!8.50e-10!347;UBERON:0002020!9.19e-10!34;UBERON:0003528!9.19e-10!34;UBERON:0004121!1.80e-09!169;UBERON:0002298!3.44e-09!8;UBERON:0000924!5.12e-09!173;UBERON:0006601!5.12e-09!173;UBERON:0001869!7.01e-09!32;UBERON:0000033!1.29e-08!123;UBERON:0001893!3.55e-08!34;UBERON:0003056!6.25e-08!61;UBERON:0002619!1.57e-07!22;UBERON:0001894!1.60e-07!7;UBERON:0006222!1.60e-07!7;UBERON:0002791!2.46e-07!33;UBERON:0001896!3.38e-07!3;UBERON:0005290!3.38e-07!3;UBERON:0010096!3.38e-07!3;UBERON:0000988!5.09e-07!3;UBERON:0001950!7.05e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!1.81e-34!115;UBERON:0001049!1.84e-25!57;UBERON:0005068!1.84e-25!57;UBERON:0006241!1.84e-25!57;UBERON:0007135!1.84e-25!57;UBERON:0002616!1.09e-20!59;UBERON:0003075!2.26e-20!86;UBERON:0007284!2.26e-20!86;UBERON:0002346!5.18e-19!90;UBERON:0001017!3.02e-17!82;UBERON:0005743!3.78e-17!86;UBERON:0003076!4.45e-17!15;UBERON:0003057!4.45e-17!15;UBERON:0000955!3.69e-16!69;UBERON:0006238!3.69e-16!69;UBERON:0004733!4.31e-15!12;UBERON:0002028!4.31e-15!12;UBERON:0007277!4.31e-15!12;UBERON:0000073!1.16e-14!94;UBERON:0001016!1.16e-14!94;UBERON:0004732!9.51e-14!13;UBERON:0002780!7.79e-13!41;UBERON:0001890!7.79e-13!41;UBERON:0006240!7.79e-13!41;UBERON:0003080!2.06e-12!42;UBERON:0000153!6.78e-11!129;UBERON:0007811!6.78e-11!129;UBERON:0002680!6.66e-10!9;UBERON:0001895!6.66e-10!9;UBERON:0010092!6.66e-10!9;UBERON:0000481!8.50e-10!347;UBERON:0002020!9.19e-10!34;UBERON:0003528!9.19e-10!34;UBERON:0004121!1.80e-09!169;UBERON:0002298!3.44e-09!8;UBERON:0000924!5.12e-09!173;UBERON:0006601!5.12e-09!173;UBERON:0001869!7.01e-09!32;UBERON:0000033!1.29e-08!123;UBERON:0001893!3.55e-08!34;UBERON:0003056!6.25e-08!61;UBERON:0002619!1.57e-07!22;UBERON:0001894!1.60e-07!7;UBERON:0006222!1.60e-07!7;UBERON:0002791!2.46e-07!33;UBERON:0001896!3.38e-07!3;UBERON:0005290!3.38e-07!3;UBERON:0010096!3.38e-07!3;UBERON:0000988!5.09e-07!3;UBERON:0001950!7.05e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.26e-20;2!UBERON:0001723;4.87e-14;3!UBERON:0001033;4.87e-14;3!UBERON:0002426;3.08e-11;1!UBERON:0003831;3.08e-11;1!UBERON:0003898;3.08e-11;1!UBERON:0004830;3.08e-11;1!UBERON:0003830;3.08e-11;1!UBERON:0005175;3.08e-11;1!UBERON:0001774;3.08e-11;1!UBERON:0001103;3.08e-11;1!UBERON:0007029;4.15e-11;1!UBERON:0001301;1.15e-10;1!UBERON:0000974;2.16e-07;6!UBERON:0002298;3.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.49e-20,2;UBERON:0001723,5.04e-14,3;UBERON:0001033,5.04e-14,3;UBERON:0010056,5.04e-14,3;UBERON:0002426,3.08e-11,1;UBERON:0003831,3.08e-11,1;UBERON:0003898,3.08e-11,1;UBERON:0004830,3.08e-11,1;UBERON:0003830,3.08e-11,1;UBERON:0005175,3.08e-11,1;UBERON:0001774,3.08e-11,1;UBERON:0001103,3.08e-11,1;UBERON:0010084,3.08e-11,1;UBERON:0007029,4.15e-11,1;UBERON:0001301,8.22e-11,1;UBERON:0002298,4.44e-07,6 | |||
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| ||
|short_description=p1@ENST00000455460 | |short_description=p1@ENST00000455460 | ||
}} | }} |
Latest revision as of 20:23, 25 July 2015
Short description: | p1@ENST00000455460 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000455460_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -10bp_to_ENST00000455460_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 2.49e-20 | 2 |
tongue | 5.04e-14 | 3 |
gustatory system | 5.04e-14 | 3 |
future tongue | 5.04e-14 | 3 |
chest muscle | 3.08e-11 | 1 |
respiratory system muscle | 3.08e-11 | 1 |
skeletal muscle of trunk | 3.08e-11 | 1 |
respiratory system skeletal muscle | 3.08e-11 | 1 |
thoracic segment muscle | 3.08e-11 | 1 |
chest organ | 3.08e-11 | 1 |
muscle of trunk | 3.08e-11 | 1 |
diaphragm | 3.08e-11 | 1 |
future diaphragm | 3.08e-11 | 1 |
surface | 4.15e-11 | 1 |
epididymis | 8.22e-11 | 1 |
brainstem | 4.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.76e-11 | 1 |