FFCP PHASE1:Hg19::chr17:80450992..80450999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80450992..80450999,+ | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr17:80450992..80450999,+ | |description=CAGE_peak_at_chr17:80450992..80450999,+ | ||
|id=chr17:80450992..80450999,+ | |id=chr17:80450992..80450999,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.94e-18!254;CL:0000548!6.70e-17!679;CL:0000004!6.70e-17!679;CL:0000255!6.70e-17!679;CL:0000012!2.13e-16!682;CL:0002076!1.87e-14!43;CL:0000223!6.64e-13!59;CL:0000220!9.23e-13!246;CL:0002321!2.33e-12!248;CL:0000003!2.90e-10!722;CL:0002368!4.07e-10!13;CL:0002202!5.04e-08!9;CL:0002632!5.04e-08!9;CL:0000063!3.75e-07!578;CL:0002251!4.79e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.94e-18!254;CL:0000548!6.70e-17!679;CL:0000004!6.70e-17!679;CL:0000255!6.70e-17!679;CL:0000012!2.13e-16!682;CL:0002076!1.87e-14!43;CL:0000223!6.64e-13!59;CL:0000220!9.23e-13!246;CL:0002321!2.33e-12!248;CL:0000003!2.90e-10!722;CL:0002368!4.07e-10!13;CL:0002202!5.04e-08!9;CL:0002632!5.04e-08!9;CL:0000063!3.75e-07!578;CL:0002251!4.79e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.06e-14;13!CL:0002202;1.86e-12;9!CL:0002632;1.86e-12;9!CL:0002076;4.85e-10;42!CL:0002328;8.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.22e-23,253;CL:0002368,9.25e-15,13;CL:0002076,1.06e-13,42;CL:0002202,1.24e-12,9;CL:0002632,1.24e-12,9;CL:0000223,3.76e-11,58;CL:0000076,8.55e-08,63;CL:0002321,8.54e-07,250;CL:0002328,8.83e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.38e-13!106;DOID:0050687!3.78e-10!143;DOID:14566!3.85e-10!239;DOID:162!6.95e-10!235 | |ontology_enrichment_disease=DOID:305!1.38e-13!106;DOID:0050687!3.78e-10!143;DOID:14566!3.85e-10!239;DOID:162!6.95e-10!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;6.42e-13;14!DOID:3908;8.00e-08;5!DOID:201;6.26e-07;6!DOID:0060100;6.26e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.82e-13,106;DOID:1749,7.34e-13,14;DOID:0050687,2.18e-10,143;DOID:3908,5.65e-08,5;DOID:201,7.93e-07,6;DOID:0060100,7.93e-07,6;DOID:162,8.55e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.01e-13!95;UBERON:0000481!2.00e-09!347;UBERON:0001444!2.12e-09!48;UBERON:0004119!3.27e-09!169;UBERON:0000925!3.27e-09!169;UBERON:0006595!3.27e-09!169;UBERON:0003104!2.13e-08!238;UBERON:0009142!2.13e-08!238;UBERON:0000475!7.05e-08!365;UBERON:0001004!2.90e-07!72;UBERON:0001007!3.27e-07!155;UBERON:0001555!3.27e-07!155;UBERON:0007026!3.27e-07!155;UBERON:0002199!4.30e-07!45;UBERON:0002416!4.30e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!5.01e-13!95;UBERON:0000481!2.00e-09!347;UBERON:0001444!2.12e-09!48;UBERON:0004119!3.27e-09!169;UBERON:0000925!3.27e-09!169;UBERON:0006595!3.27e-09!169;UBERON:0003104!2.13e-08!238;UBERON:0009142!2.13e-08!238;UBERON:0000475!7.05e-08!365;UBERON:0001004!2.90e-07!72;UBERON:0001007!3.27e-07!155;UBERON:0001555!3.27e-07!155;UBERON:0007026!3.27e-07!155;UBERON:0002199!4.30e-07!45;UBERON:0002416!4.30e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.24e-07;5!UBERON:0000065;2.39e-07;44!UBERON:0000072;8.15e-07;37!UBERON:0004815;8.73e-07;3!UBERON:0002031;8.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.26e-08,54;UBERON:0001004,1.67e-08,74;UBERON:0008947,2.92e-08,38;UBERON:0003258,2.92e-08,38;UBERON:0000365,5.65e-08,5;UBERON:0004119,9.67e-08,160;UBERON:0000925,9.67e-08,160;UBERON:0006595,9.67e-08,160;UBERON:0000072,1.24e-07,47;UBERON:0007196,8.26e-07,15;UBERON:0001558,8.26e-07,15;UBERON:0004815,8.83e-07,3;UBERON:0002031,8.83e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,5.06599756336621,1.26343974685366,0.783556884599516,0.245733936501509,0,0,0,0.37129905888014,1.32558950291166,0,0,0,0,0.123121058076788,2.04000691244253,0.313454721478088,0.286235987131057,1.09499540058307,0.376627918784408,0,0,0,0,0,0,20.2272669385364,9.93979531968225,32.1685988845105,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,1.99556457716308,0.702678285545008,0,2.91436230634034,10.381964397964,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.25326102332916,0.529636723252875,2.86836620748814,2.12801029319014,0,1.06748995729705,0,0,0.404132016209064,0.326923806226917,0,0,0.468642863667593,4.37024107562449,0.570471821544449,1.04614076386261,2.46612447151906,1.29498355494505,0.98315564691574,1.02077085627447,0.61417158655884,0.826606249406124,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.750711119231785,0.277064115484183,0.877955241761676,0.612975591598039,0.150238058906597,0.113432183160021,0.538168907066586,0,0,0.900273288253207,0,0,0,0.506328996723799,0,0.757301322732344,0,0,0,0.201504196455281,0.339121184620975,0.57978255948989,0.818238361772504,0.573609190778008,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0.464367928031979,0,1.8929088006375,1.68584690078102,1.68707720918437,1.43382164552112,1.74303555273925,0.71181185733329,0.674156540800822,0.98110732562673,1.53898862778556,0,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,1.31700342490351,3.37205259772859,1.70899253099772,5.46271826435325,0,1.03993478527958,1.44331342025273,0,0.587043471179108,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.671928512795438,1.84307626415102,4.47792613514241,2.03443756959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,3.57656445851882,0.845302752556,0,0,4.11531798819427,15.6034045225606,4.79559922228979,0,0,2.46972101034231,0,0.355391948742546,5.543663110534,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.579125226670317,0,0.716243852959582,0,0,0,0,1.01637849688985,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.925258162815933,0.532685175939381,0.821271560138091,0,0.929683027679674,0,0.200506470303285,1.01289087829486,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0.541892875087706,1.50506932156456,0,0,0.447749509444357,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0,0,0,0,7.80072295243825,0,0.386682873168488,1.69453478826109,1.5350367472613,2.06754858726796,0.429680979473094,1.16013355131383,0.511359764496605,0,0.661139661443912,1.34533047155574,11.9955949744909,1.31505115112215,0,0.31481234683064,0.6970372701606,0,0,1.73986598415015,0.37064843820784,1.14499909393593,0,0,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,1.26377536871694,0.48763373908959,0.487426979262569,1.05650146756755,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0.92947049429925,0.281695602532241,0.860468113224309,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,0,0.75894634753143,1.04980416073495,3.27155183266741,8.71392958196524,58.8011318251142,0,2.15252686335615,1.68471475667626,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0,0.534120355637366,0,7.35120647943095,0,0,0,0.478278818186467,0.199579371432817,0.191505370132367,0,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0.146508179271894,0.242721043499027,0,1.98895302764489,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,1.79736702294654,0.537063524026827,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0.174919999992391,0,13.7690072425455,10.4243996620034,0,0,0,0,0,0,0,0,0,0,1.41620002574687,0.278847488557207,0.0769502585037971,2.96249345202203,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0.167821586975843,2.27704479269022,0.794682894901893,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,1.9566461893209,0.242780379534093,0,0,0.30607276163049,0,3.00646838828985,0,0,0,0,0,0.284609546029793,0,0.173559738335131,2.84177952501695,2.69883540399248,0,0,1.35458863804719,3.21592995179216,1.64230914106418,0,0,0,4.52238351334278,3.17943378724783,0,0,1.68333522528221,0.213452994739353,0.999048047910651,0.72045208577053,0,0,4.46569873763264,3.72757606696298,5.42096279618629,0.67952103036807,0.732219924186332,0.305994652908965,2.02265412931063,0,0,0,3.0083580899397,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0.157566364614447,0,0.067403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| ||
|short_description=p@chr17:80450992..80450999,+ | |short_description=p@chr17:80450992..80450999,+ | ||
}} | }} |
Latest revision as of 23:08, 25 July 2015
Short description: | p@chr17:80450992..80450999, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80450992..80450999, + |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.22e-23 | 253 |
respiratory epithelial cell | 9.25e-15 | 13 |
endo-epithelial cell | 1.06e-13 | 42 |
epithelial cell of tracheobronchial tree | 1.24e-12 | 9 |
epithelial cell of lower respiratory tract | 1.24e-12 | 9 |
endodermal cell | 3.76e-11 | 58 |
squamous epithelial cell | 8.55e-08 | 63 |
embryonic cell | 8.54e-07 | 250 |
bronchial epithelial cell | 8.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.26e-08 | 54 |
respiratory system | 1.67e-08 | 74 |
respiratory primordium | 2.92e-08 | 38 |
endoderm of foregut | 2.92e-08 | 38 |
urothelium | 5.65e-08 | 5 |
endoderm-derived structure | 9.67e-08 | 160 |
endoderm | 9.67e-08 | 160 |
presumptive endoderm | 9.67e-08 | 160 |
segment of respiratory tract | 1.24e-07 | 47 |
tracheobronchial tree | 8.26e-07 | 15 |
lower respiratory tract | 8.26e-07 | 15 |
lower respiratory tract epithelium | 8.83e-07 | 3 |
epithelium of bronchus | 8.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.82e-13 | 106 |
squamous cell carcinoma | 7.34e-13 | 14 |
cell type cancer | 2.18e-10 | 143 |
non-small cell lung carcinoma | 5.65e-08 | 5 |
connective tissue cancer | 7.93e-07 | 6 |
musculoskeletal system cancer | 7.93e-07 | 6 |
cancer | 8.55e-07 | 235 |