FFCP PHASE1:Hg19::chr18:26425339..26425342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:26425339..26425342,+ | |||
|coexpression_cluster_id=C1774 | |coexpression_cluster_id=C1774 | ||
|description=CAGE_peak_at_chr18:26425339..26425342,+ | |description=CAGE_peak_at_chr18:26425339..26425342,+ | ||
|id=chr18:26425339..26425342,+ | |id=chr18:26425339..26425342,+ | ||
|ontology_enrichment_celltype=CL:1001319!9.85e-34!1;CL:1000600!9.85e-34!1;CL:0000054!7.67e-18!2;CL:0000137!7.67e-18!2;CL:0000092!7.67e-18!2;CL:0000062!4.25e-13!11;CL:0000375!4.25e-13!11;CL:0000335!4.25e-13!11;CL:1000306!1.44e-09!4;CL:0002547!1.44e-09!4;CL:0000035!1.21e-07!20;CL:0002149!7.58e-07!6;CL:0002255!7.58e-07!6 | |ontology_enrichment_celltype=CL:1001319!9.85e-34!1;CL:1000600!9.85e-34!1;CL:0000054!7.67e-18!2;CL:0000137!7.67e-18!2;CL:0000092!7.67e-18!2;CL:0000062!4.25e-13!11;CL:0000375!4.25e-13!11;CL:0000335!4.25e-13!11;CL:1000306!1.44e-09!4;CL:0002547!1.44e-09!4;CL:0000035!1.21e-07!20;CL:0002149!7.58e-07!6;CL:0002255!7.58e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000062;2.62e-23;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.25e-19,11;CL:0000375,2.25e-19,11;CL:0000335,2.25e-19,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.25e-19;11 | |||
|ontology_enrichment_disease=DOID:3347!1.84e-34!1;DOID:0060085!3.61e-34!1;DOID:3165!3.61e-34!1;DOID:0060121!3.61e-34!1;DOID:2438!3.61e-34!1;DOID:4418!3.61e-34!1;DOID:201!4.34e-23!6;DOID:0060100!4.34e-23!6;DOID:200!7.67e-18!2;DOID:4305!7.67e-18!2;DOID:0060072!1.32e-09!4;DOID:3001!7.58e-07!6 | |ontology_enrichment_disease=DOID:3347!1.84e-34!1;DOID:0060085!3.61e-34!1;DOID:3165!3.61e-34!1;DOID:0060121!3.61e-34!1;DOID:2438!3.61e-34!1;DOID:4418!3.61e-34!1;DOID:201!4.34e-23!6;DOID:0060100!4.34e-23!6;DOID:200!7.67e-18!2;DOID:4305!7.67e-18!2;DOID:0060072!1.32e-09!4;DOID:3001!7.58e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3347;5.42e-195;1!DOID:201;4.27e-34;6!DOID:0060100;4.27e-34;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.42e-195,1;DOID:201,4.27e-34,6;DOID:0060100,4.27e-34,6 | |||
|ontology_enrichment_uberon=UBERON:0004645!9.85e-34!1;UBERON:0001256!9.85e-34!1;UBERON:0001259!9.85e-34!1;UBERON:0001255!1.27e-17!2;UBERON:0001556!1.27e-17!2;UBERON:0000060!6.00e-12!12;UBERON:0000014!1.32e-09!4;UBERON:0000415!1.44e-09!4;UBERON:0007240!1.44e-09!4;UBERON:0005742!1.44e-09!4;UBERON:0005734!1.44e-09!4;UBERON:0004664!1.44e-09!4;UBERON:0004663!1.44e-09!4;UBERON:0003350!7.49e-08!5;UBERON:0000365!7.49e-08!5;UBERON:0005910!9.49e-07!6 | |ontology_enrichment_uberon=UBERON:0004645!9.85e-34!1;UBERON:0001256!9.85e-34!1;UBERON:0001259!9.85e-34!1;UBERON:0001255!1.27e-17!2;UBERON:0001556!1.27e-17!2;UBERON:0000060!6.00e-12!12;UBERON:0000014!1.32e-09!4;UBERON:0000415!1.44e-09!4;UBERON:0007240!1.44e-09!4;UBERON:0005742!1.44e-09!4;UBERON:0005734!1.44e-09!4;UBERON:0004664!1.44e-09!4;UBERON:0004663!1.44e-09!4;UBERON:0003350!7.49e-08!5;UBERON:0000365!7.49e-08!5;UBERON:0005910!9.49e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.85e-12;18!UBERON:0004765;4.34e-09;26 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr18:26425339..26425342,+ | |short_description=p@chr18:26425339..26425342,+ | ||
}} | }} |
Latest revision as of 00:14, 26 July 2015
Short description: | p@chr18:26425339..26425342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:26425339..26425342, + |
Coexpression cluster: | C1774_osteosarcoma_Chondrocyte_anaplastic_fibrosarcoma_Myoblast_ductal_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.25e-19 | 11 |
osteoprogenitor cell | 2.25e-19 | 11 |
mesenchyme condensation cell | 2.25e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.42e-195 | 1 |
connective tissue cancer | 4.27e-34 | 6 |
musculoskeletal system cancer | 4.27e-34 | 6 |