FFCP PHASE1:Hg19::chr18:41106373..41106378,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:41106373..41106378,- | |||
|coexpression_cluster_id=C700 | |coexpression_cluster_id=C700 | ||
|description=CAGE_peak_at_chr18:41106373..41106378,- | |description=CAGE_peak_at_chr18:41106373..41106378,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000667!1.54e-51!6;CL:0000058!1.54e-51!6;CL:0000138!1.54e-51!6;CL:0000153!2.94e-49!9;CL:0000447!2.94e-49!9;CL:0000327!1.25e-31!14;CL:0000515!2.25e-29!4;CL:0000499!5.67e-22!27;CL:0002561!9.73e-14!1;CL:0000151!1.66e-12!35;CL:0000055!2.53e-08!180;CL:0002617!1.87e-07!2 | |ontology_enrichment_celltype=CL:0000667!1.54e-51!6;CL:0000058!1.54e-51!6;CL:0000138!1.54e-51!6;CL:0000153!2.94e-49!9;CL:0000447!2.94e-49!9;CL:0000327!1.25e-31!14;CL:0000515!2.25e-29!4;CL:0000499!5.67e-22!27;CL:0002561!9.73e-14!1;CL:0000151!1.66e-12!35;CL:0000055!2.53e-08!180;CL:0002617!1.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.79e-195;3!CL:0000056;6.94e-147;4!CL:0000680;1.28e-84;7!CL:0002321;2.90e-40;15 | |ontology_enrichment_celltype_v019=CL:0000515;2.79e-195;3!CL:0000056;6.94e-147;4!CL:0000680;1.28e-84;7!CL:0002321;2.90e-40;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,6.94e-147,4;CL:0000680,2.67e-11,58;CL:0000056,2.67e-11,58;CL:0000355,2.67e-11,58 | |||
|ontology_enrichment_development_v019=CL:0000515;6.94e-147;4!CL:0000355;4.37e-10;58 | |ontology_enrichment_development_v019=CL:0000515;6.94e-147;4!CL:0000355;4.37e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005933!9.73e-14!1;UBERON:0005942!9.73e-14!1;UBERON:0005932!9.73e-14!1 | |ontology_enrichment_uberon=UBERON:0005933!9.73e-14!1;UBERON:0005942!9.73e-14!1;UBERON:0005932!9.73e-14!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.83e-38;16!UBERON:0002036;7.83e-38;16!UBERON:0002385;1.08e-19;31!UBERON:0001015;1.08e-19;31!UBERON:0000383;1.08e-19;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;7.83e-38;16!UBERON:0002036;7.83e-38;16!UBERON:0002385;1.08e-19;31!UBERON:0001015;1.08e-19;31!UBERON:0000383;1.08e-19;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.22e-10,62;UBERON:0002036,1.22e-10,62;UBERON:0003082,1.22e-10,62;UBERON:0002385,2.44e-10,64;UBERON:0001015,2.44e-10,64;UBERON:0000383,2.44e-10,64;UBERON:0002329,2.01e-09,71;UBERON:0003059,2.01e-09,71;UBERON:0007282,2.01e-09,71;UBERON:0004290,2.01e-09,71;UBERON:0009618,2.01e-09,71;UBERON:0003077,2.63e-09,72;UBERON:0007285,2.63e-09,72;UBERON:0007524,3.42e-09,73;UBERON:0007503,1.14e-08,78;UBERON:0000486,3.31e-08,83 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90909528002464,1.2328579353023,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90909528002464,1.2328579353023,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:41106373..41106378,- | |short_description=p@chr18:41106373..41106378,- | ||
}} | }} |
Latest revision as of 00:56, 26 July 2015
Short description: | p@chr18:41106373..41106378, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:41106373..41106378, - |
Coexpression cluster: | C700_Myoblast_Fibroblast_Adipocyte_Preadipocyte_duodenum_Monocytederived_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 6.94e-147 | 4 |
muscle precursor cell | 2.67e-11 | 58 |
myoblast | 2.67e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.22e-10 | 62 |
striated muscle tissue | 1.22e-10 | 62 |
myotome | 1.22e-10 | 62 |
muscle tissue | 2.44e-10 | 64 |
musculature | 2.44e-10 | 64 |
musculature of body | 2.44e-10 | 64 |
somite | 2.01e-09 | 71 |
presomitic mesoderm | 2.01e-09 | 71 |
presumptive segmental plate | 2.01e-09 | 71 |
dermomyotome | 2.01e-09 | 71 |
trunk paraxial mesoderm | 2.01e-09 | 71 |
paraxial mesoderm | 2.63e-09 | 72 |
presumptive paraxial mesoderm | 2.63e-09 | 72 |
dense mesenchyme tissue | 3.42e-09 | 73 |
epithelial vesicle | 1.14e-08 | 78 |
multilaminar epithelium | 3.31e-08 | 83 |